Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12975g00001 ATGGCTGATACAGGTAGAGATGCAGTGAGAGGGGTGATAGTGTGTGATAACAAATGTGGCTGCGCAGTTCCATGCGCCGGTGGTTCCGGTTGCAGGTGCACGAGTGGTGGTACTGCCTCGGGAGGGGGTGAACACGTGACATGCTCGTGCGGACAGCACTGCGAGTGCAATCCATGCTCGTGCCCTAAGACTGTGGCTGCTGGAACTGGTATTTCTAGGGATTCCATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCATGGAGGAAGAAGAGAAAGTATGAGCTTGGTCGCCAGTCAGCAAACACCAAGTTATCAAGCAACAAGACAATCCGGAGGATTCGTGTTAGAGGTGGCAATGTGAAATGGAGGGCATTGAGGTTGGATACTGGAAATTACTCATGGGGTAGTGAAGCAGTAACTCGCAAAACTCGTATTCTGGATGTTGTTTACAATGCCTCAAACAACGAGCTCGTGCGAACTCAGACCTTGGTCAAGAGTGCTATTGTTCAGGTTGATGCTGCTCCTTTCAAGCAGTGGTACCTTCAGCACTATGGTGTTGAAATTGGAAGAAAAAAGAAAGTAGCATCCAAGAAGGACTCTACTGAGGAGAGTGAGGCTGTTGCTGCAGAAGAAACTAAGAAAAGCAACCATGTGCAGAGAAAACTTGAGAAACGCCAGAAAGAACGCAAACTTGATGCCCACATTGAAGAGCAATTTGGTGGCGGCCGATTGTTGGCCTGTATTTCTTCTCGTCCTGGTCAATGTGGTAGAGCTGATGGGTACATTCTGGAAGGTAAGGAGCTGGAATTTTACATGAAGAAAATCCAGAGGAAGAAGGGAAAGGGTGCTGCTTAA 861 0.4866 MADTGRDAVRGVIVCDNKCGCAVPCAGGSGCRCTSGGTASGGGEHVTCSCGQHCECNPCSCPKTVAAGTGISRDSMHKRRATGGKKKAWRKKRKYELGRQSANTKLSSNKTIRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVEIGRKKKVASKKDSTEESEAVAAEETKKSNHVQRKLEKRQKERKLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAA 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12975g00001 286 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Mupr12975g00001 286 MobiDBLite consensus disorder prediction 196 231 - -
Mupr12975g00001 286 NCBIfam ribosomal protein eS8 70 267 IPR001047 GO:0003735|GO:0005840|GO:0006412
Mupr12975g00001 286 PRINTS Plant PEC family metallothionein signature 14 22 IPR000316 GO:0008270
Mupr12975g00001 286 PRINTS Plant PEC family metallothionein signature 56 63 IPR000316 GO:0008270
Mupr12975g00001 286 PRINTS Plant PEC family metallothionein signature 29 36 IPR000316 GO:0008270
Mupr12975g00001 286 PRINTS Plant PEC family metallothionein signature 22 28 IPR000316 GO:0008270
Mupr12975g00001 286 PANTHER 40S RIBOSOMAL PROTEIN S8 70 283 IPR001047 GO:0003735|GO:0005840|GO:0006412
Mupr12975g00001 286 Gene3D - 100 230 - -
Mupr12975g00001 286 Gene3D - 231 283 - -
Mupr12975g00001 286 FunFam 40S ribosomal protein S8 230 283 - -
Mupr12975g00001 286 Pfam Plant PEC family metallothionein 15 67 IPR000316 GO:0008270
Mupr12975g00001 286 ProSitePatterns Ribosomal protein S8e signature. 79 98 IPR018283 GO:0003735|GO:0005840|GO:0006412
Mupr12975g00001 286 CDD Ribosomal_S8e_like 73 265 - -
Mupr12975g00001 286 Pfam Ribosomal protein S8e 73 265 IPR022309 -
Mupr12975g00001 286 FunFam 40S ribosomal protein S8 100 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12975g00001 Mupr-Chr12975 5956 12917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12975g00001 70 274 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 84.390 9.07e-125 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12975g00001 K02995 - gmx:100500112 393.275