Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12970g00001 ATGATCAGGATTGTGTCATTTCATATGGAGGATATCTTTCTCACCATCGTAACAAAGATTGCAGAATATGCAGTGGATCCAATTTTACAGCATGCTCGATATTTGTGTTGTTTCAACAACTATGTTGGGATTCTTTCAAATGCAAAAGAAGATTTGGAATTGACCCGAGTCATCATGGAGGAACGAGTTAGAGAGGCCACTAACAGGACTGAAAAAATTGAACCAACAGTTGCGAAGTGGCTAAAAGATGTTGAGAATGTCTTAGGAGAAGTGCAGCTGCTGGAAAGAAGAATTCCAGGAGTAAGCAAAACCTATTTCAAAAGGCGAAGCCAATATTTTCTTACAAAAGAAATAGCAAGAAGAATAGAAAAAATGACTGAGCTCAATCGTAACAGCAAGTTTGAGCCATTTTCAAGGATTACTGAACTTCCAGCCATGAAGTACTATTCTTCCAAAGATTTTATTTTTTTTGAATCTACAAAAACAGCTTATAACAAGGTTTTCGAAGAATTGAAAGATAAAAGTGTAAGCATGATTGGACTAGTTGGAATGGGAGGCTCTGGAAAAACCACTTTGGCGAAAGAGGTGGGTAAGAAAGCTGAGGAGTTAAAACTTTTTGAGAAGGTTGTTGTGGCAATGGTCTCTCAGCCTCCAAATATTAGAAAAATCCAAGCACAAATTGCTGATCAATTAGGTTTCAAATTACAGGAAGAATCTGACGAAGGTAGAGCACAAAGATTATCACAGAGATTAAGTAAAGGCAACACTCTTCTAATATTAGATGATGTATGGGAAAAGCTAAACTTTGAATCTTTAGGTATTCCATCCAATGAAAGCAAGGGTTGTGGAGTACTCCTAACAACTCGGAGCAGAGAAGTATGCACTTCTATGCAATGCCAAAGTATAATTGAGCTCAATCTCCTAACTATCGAGGAAGCTTGGACTTTGTTCAAATTGCTTGCAAACATCAATGATGACTCCTTACATGATTTGCAAGTTGTGGCAAGAGAAGTTGTCAATGAATGTAAGGGATTGCCTATTGCAATTGTGACGATGGGAAGCACGCTAAGGGGGAAAACTTTAGGCAACTGGAAGTCAGCATTGTCAAGACTACAAAACTCCAAACCATTGGATATTCCAAAAGGCTTAACAAGTCCTCATATTTGTCTTAAATTAAGTTATGATAATTTGACAAATCAGTTAGCCAAGTCCTTGTTATTGATGTGTTCTATATTTCCAGAGGATCATGAAATTGATTTGGAAGATTTATTTCGATTTGGAAGGGAACTTGGCCTAATTGGGACTATTGGAACATTAGAGGAAGCAAGGGGAGAGGTGCATGTAGCTGTTAACATCCTCCTAGACTCTTACTTGTTTCTGCATTCAAATGAAAATGAAAAGGTGAAAATGCATGACATGGTTCGTGATGTAGTCTTGTGGATCGCATCTGAAAGGGGTCAAGCAATTTTGGCACGTACTGGAATGGATCCAAGAATGTTGGCAGAGGATGAAACAATAAAAGATAAGAGAGCAATATTATTATGGGATTTACGAAATGGTCAGCTTCCTGATGACAATCAGTTCAATTGTCCAACACTAGAAATTCTCTTGCTCCATTCTCCAAAGGTTGGCTTTCAAGTATCAAATGCATGTCTTGAAAGGATGAAAATGCTTAAAACCCTGGCATTCTTAACAATTGGCTACACGTGGAAGTCCTTTAGGTTCGAGAGAAATGCTTTGTCACTGCCACAGTCAATTGTGTCATTAAAAAGCCTTCACACTCTGTCATTGAGAGGTTACCAATTAGGTGACATCTCCGTTTTGGGAAGCCTACAAGCACTTGAGATTCTTGACTTGCGTGGTTCTTCTTTTCAAGAACTGCCTAATGGAATTGTAGCATTAAAGAAATTGAAGCTTCTGGATTTATACGGTTGTTTGATTGACCAAAGTAATGCTTATGAAGTTATAAGGAAATGTTCACAGCTAGAGGAATTGTATTTGCATTTACTCCAATCTAAAAAGGACCTTCCACATGATGTCTCTTTCCCAAGATTGAAGAGGTATAATATAACACAAACTCATAATGAAGTCAACAATGACAGTTTGAACAAGTGTAGACCATCTAGAAGTTTATGCATGGATGGTTTTAATGCCTCTGCTCAAAATTTTACATCGTTACCGATCAAGAATCTTTTTGTAAAAGCAGAGTACCTTTATTTGGAGAGGCTTTGCGGGGGATACAAAAATGTAATCCCATCCATGGATCCACAAGGCATGAATGAGTTGAATTTCCTAATCCTCTTTTCTTGTGGAGAGATAGAATGCCTATTTGACAGTACTATCATTACTAATTCCAATGTTGATATGCTTCAAACTAAAGTGTTCTCCAACCTAACTGACTTAAAGTTAGCTTGCTTGGATAGCCTTCGGGAAGTGTTTCATGACCCCTCTTCACGATGCTCTCTTGAAAATTTACAAGAGTTATGGATAACAGAATGTCAACAATTGTATAACATATCCTTTCCAAGGAACTCAAAGCTTTGTTGTCTCAAGGAGATAACAATAAGTTGGTGCCCAATGCTAACTTCGCTCTTCATGCCATCCATTGCCAACACTCTAGTGCTGTTGGAGTCTCTACAAATATGTTCTTGCAATGAATTGAAGCACATAATAGAAGGCAATGTTGATTATGGTAGCGGTCAAAGTCATACCTCTTTGACGCTCCCAAAATTAAGTACTCTTCGCATTGAATATTGCAACAAGTTGGAATATATATTCCCTACGTGTTTTGGCATTAAAATAAAACATCATCTTTCAATGTACAAGCACCAGAGTCACCAGTTGCATTCATTACCGAATCTGAAAACTTTAGACTGCACTGAGTGTCCAAGACTGTCTAAATTTTTTGGGCAAAAGGCGGTGATTGATTCAGAAGAAGATTCTTTACAGAGTAAGGAGAAGGATGTATTATGTTTGGTTGGCTCCCTCGAATTTAAAGCTAGTCTTCAATTTAAAGACCTTACATTGTGCAATGTTGGAGTAGTAGGTGTTTTTCAATTCCAAATTGGAGAACTTGGGAACGATAAAGAACTAGTTCCCTTAAACTTGGATCTATCTAAGCTCCGATTGTGGAGTCTACCTGAGCTCAAGTTCATCTGGAAGGGGCCCACAAATTTTCTAAACCTCCGATTGCTTTGTAGTATTAATGTGAGTAGTTGTCCAAAATTGAAAACCATCTTCTCCCCTACCATTGTTAGAAGCTTGCCCGTGTTGGAATATCTGGATATACATAACTGTGACGAATTGGAGCAAATATTTGATTTAGGTGATGCACAAGAGCTCAAAATCTTAGGTGATGCACAAGAGCTCAAAATCCTATATGCTTGTTCCCAAGAAGTGTGCTTCCCAAAACTCGATTTTATTAGAATTCGAAAGTGTAACAAGTTGAAATGCCTTTTCTATAATTTTGTGGCTGGTCATTTTCCCAGTCTGATCAAAATGGAAATAATAGAGTGCTTTCAATTGGAGAAGGTTTTTAATTTTGAACATGAAACTGATAATGATGATCAAGAAGGGACTGATAAGGATGGAGAACAAGAACTGCTAGAGAACCTAAAAGATATAAGACTCTCAAGTTTGTCAAACTTCAAAGAGATTCACCACAGATTTAAGTTAAAAGATCATGTTAAACAGATCATAGAAGATTGTCCTAAATATGCTCCAAGTTTATATTTACACCCAGTTAAATTTTGCACGATGATAAAGTCCTCTCATAAGGATGAAACTATTATACTTGCTCTAATTTACTGTGCT 3813 0.374 MIRIVSFHMEDIFLTIVTKIAEYAVDPILQHARYLCCFNNYVGILSNAKEDLELTRVIMEERVREATNRTEKIEPTVAKWLKDVENVLGEVQLLERRIPGVSKTYFKRRSQYFLTKEIARRIEKMTELNRNSKFEPFSRITELPAMKYYSSKDFIFFESTKTAYNKVFEELKDKSVSMIGLVGMGGSGKTTLAKEVGKKAEELKLFEKVVVAMVSQPPNIRKIQAQIADQLGFKLQEESDEGRAQRLSQRLSKGNTLLILDDVWEKLNFESLGIPSNESKGCGVLLTTRSREVCTSMQCQSIIELNLLTIEEAWTLFKLLANINDDSLHDLQVVAREVVNECKGLPIAIVTMGSTLRGKTLGNWKSALSRLQNSKPLDIPKGLTSPHICLKLSYDNLTNQLAKSLLLMCSIFPEDHEIDLEDLFRFGRELGLIGTIGTLEEARGEVHVAVNILLDSYLFLHSNENEKVKMHDMVRDVVLWIASERGQAILARTGMDPRMLAEDETIKDKRAILLWDLRNGQLPDDNQFNCPTLEILLLHSPKVGFQVSNACLERMKMLKTLAFLTIGYTWKSFRFERNALSLPQSIVSLKSLHTLSLRGYQLGDISVLGSLQALEILDLRGSSFQELPNGIVALKKLKLLDLYGCLIDQSNAYEVIRKCSQLEELYLHLLQSKKDLPHDVSFPRLKRYNITQTHNEVNNDSLNKCRPSRSLCMDGFNASAQNFTSLPIKNLFVKAEYLYLERLCGGYKNVIPSMDPQGMNELNFLILFSCGEIECLFDSTIITNSNVDMLQTKVFSNLTDLKLACLDSLREVFHDPSSRCSLENLQELWITECQQLYNISFPRNSKLCCLKEITISWCPMLTSLFMPSIANTLVLLESLQICSCNELKHIIEGNVDYGSGQSHTSLTLPKLSTLRIEYCNKLEYIFPTCFGIKIKHHLSMYKHQSHQLHSLPNLKTLDCTECPRLSKFFGQKAVIDSEEDSLQSKEKDVLCLVGSLEFKASLQFKDLTLCNVGVVGVFQFQIGELGNDKELVPLNLDLSKLRLWSLPELKFIWKGPTNFLNLRLLCSINVSSCPKLKTIFSPTIVRSLPVLEYLDIHNCDELEQIFDLGDAQELKILGDAQELKILYACSQEVCFPKLDFIRIRKCNKLKCLFYNFVAGHFPSLIKMEIIECFQLEKVFNFEHETDNDDQEGTDKDGEQELLENLKDIRLSSLSNFKEIHHRFKLKDHVKQIIEDCPKYAPSLYLHPVKFCTMIKSSHKDETIILALIYCA 1271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12970g00001 1271 PRINTS Disease resistance protein signature 178 193 - -
Mupr12970g00001 1271 PRINTS Disease resistance protein signature 250 264 - -
Mupr12970g00001 1271 PRINTS Disease resistance protein signature 342 356 - -
Mupr12970g00001 1271 PRINTS Disease resistance protein signature 949 965 - -
Mupr12970g00001 1271 SUPERFAMILY L domain-like 469 775 - -
Mupr12970g00001 1271 Coils Coil 49 69 - -
Mupr12970g00001 1271 SUPERFAMILY RNI-like 1031 1177 - -
Mupr12970g00001 1271 Gene3D - 142 304 IPR027417 -
Mupr12970g00001 1271 FunFam Probable disease resistance protein At1g61300 146 301 - -
Mupr12970g00001 1271 Gene3D Ribonuclease Inhibitor 981 1240 IPR032675 -
Mupr12970g00001 1271 Pfam NB-ARC domain 162 395 IPR002182 GO:0043531
Mupr12970g00001 1271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 409 IPR027417 -
Mupr12970g00001 1271 SUPERFAMILY RNI-like 780 966 - -
Mupr12970g00001 1271 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 45 977 - -
Mupr12970g00001 1271 Gene3D - 308 393 IPR042197 -
Mupr12970g00001 1271 Gene3D Ribonuclease Inhibitor 699 975 IPR032675 -
Mupr12970g00001 1271 Gene3D - 394 479 IPR036388 -
Mupr12970g00001 1271 Gene3D Ribonuclease Inhibitor 502 690 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12970g00001 Mupr-Chr12970 2472 6831 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12970g00001 179 516 WRKY Transcription Factor Family AT5G45050 25.656 5.27e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12970g00001 - - gmx:102662074 1544.25