Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12946g00001 ATGGATCTTGAGACAATGCTCAAAGAAACCTATGTTTCACAGCCACAAGAAAGCTTCTTGCAACCTAGCATGAAACACATGCTTCCTTTTGGGAACCCTTCATTCTTGCAAGATTTTAACCATATTGATCAGTTTCACGTGAATGTCTCCTCGCCCAATCCAATCCAAACTCCAAATTTTGATGCTTTTGACAATTTCACCTTTGCTAATTCATCACCAGGTTTTGATGTTTACGAGTGCAAACCTTTTGTGGAGAATGTGCACGCTCATGTTATGGACAATTTCCTATATGGAAATTATAGCTTCAACCACCCTCAAAGGAATCAACTAGATATGATGGTTGCAAATCAAAGTCTTTTGCCTTTCAATCCTCAAGAAACCAAGTCACCCAATTTTGTTGTACCAGATGAAGTTTCATGCATATCATCGGTGAATTATTACAAAAGAGTTGGTGCCAATAAAAATAACAAGTCCTATCCAACCACTAGAAGAACATACAAAGTTCGCAAGAAGTCCAACATAGTAAAGGGGCAATGGACAATAGAAGAAGATGGATTGTTGGTTCAACTTGTGGAACAATATGGATTGAGGAAGTGGTCTCATATTGCTAAGATATTACCCGGAAGAATAGGAAAACAATGCAGAGAGAGATGGCATAACCATTTAAGGCCTGACATCAAGAAGGACACATGGACTGATGAAGAGGATAAAATACTAATTGAAGCTCATGCACAGATAGGAAACAAATGGGCTGAGATTGCTAAAAGGTTGCCAGGAAGAACTGAGAACTCAATAAAAAACCACTGGAATGCAACCAAGAGAAGGCAATATTCCAAAAGAAAGTGTCGCTCAAAGTACCCTAGAGGCATTCTTCTGCAAGAATATATTAAGAGTTTGAACTTAGACAAGAACCCTCCAATAGATTATAGGAGAAAATCTTCTGCCAATTATGCTAATGCCATGAAAAACAAAACCAGCACAAGCAAAGTCACAGTACCAGCTCTGCCCCAGACAGCACATAAATTTTGTGCCAATGATTGCTTTGCACCAAATTATATTGATAATTTTAATGTGGTTCCAGATTTTTTCTTTGGTGAAAATTTGTTTGAAGGAGGGTGTAGTATTGATTCTCTTCTAGATGATGTGCATTGTGCAACTCCAATGGATAAGAAAGATTTTGAAGGAAAAATGCAATGTGATCATGTTGAGACGGAGATGCCACTAGAGATGTTGGAGGTTGAAGTTAAGAAGGAGTTGGATTTGGTTGAGATGATGTCTCAGATTAATAATGAAATTGTTCATAAAATTCAGAGGGATGAGGAAGAGGTGGAACTTGGACCCTGA 1344 0.3817 MDLETMLKETYVSQPQESFLQPSMKHMLPFGNPSFLQDFNHIDQFHVNVSSPNPIQTPNFDAFDNFTFANSSPGFDVYECKPFVENVHAHVMDNFLYGNYSFNHPQRNQLDMMVANQSLLPFNPQETKSPNFVVPDEVSCISSVNYYKRVGANKNNKSYPTTRRTYKVRKKSNIVKGQWTIEEDGLLVQLVEQYGLRKWSHIAKILPGRIGKQCRERWHNHLRPDIKKDTWTDEEDKILIEAHAQIGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCRSKYPRGILLQEYIKSLNLDKNPPIDYRRKSSANYANAMKNKTSTSKVTVPALPQTAHKFCANDCFAPNYIDNFNVVPDFFFGENLFEGGCSIDSLLDDVHCATPMDKKDFEGKMQCDHVETEMPLEMLEVEVKKELDLVEMMSQINNEIVHKIQRDEEEVELGP 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12946g00001 447 CDD SANT 230 273 IPR001005 -
Mupr12946g00001 447 ProSiteProfiles Myb-like domain profile. 171 222 IPR001005 -
Mupr12946g00001 447 ProSiteProfiles Myb-like domain profile. 223 273 IPR001005 -
Mupr12946g00001 447 FunFam Transcription factor MYB119 229 293 - -
Mupr12946g00001 447 Gene3D - 175 227 - -
Mupr12946g00001 447 CDD SANT 179 222 IPR001005 -
Mupr12946g00001 447 PANTHER MYB PROTEIN-RELATED 155 321 - -
Mupr12946g00001 447 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 227 277 IPR017930 -
Mupr12946g00001 447 Gene3D - 230 289 - -
Mupr12946g00001 447 FunFam Transcriptional activator Myb isoform A 175 228 - -
Mupr12946g00001 447 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 171 226 IPR017930 -
Mupr12946g00001 447 Pfam Myb-like DNA-binding domain 229 270 IPR001005 -
Mupr12946g00001 447 Pfam Myb-like DNA-binding domain 176 222 IPR001005 -
Mupr12946g00001 447 SMART sant 227 275 IPR001005 -
Mupr12946g00001 447 SMART sant 175 224 IPR001005 -
Mupr12946g00001 447 SUPERFAMILY Homeodomain-like 173 269 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12946g00001 Mupr-Chr12946 1227 3066 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12946g00001 76 382 MYB Transcription Factor Family AT4G18770 50.000 1.06e-96 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr12946g00001 Myb_DNA-binding 1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12946g00001 K09422 - gmx:102662267 684.1