Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12944g00005 ATGGATTGGGACGGGAAGGAGTTTGCTTGGGATCCACGTGGGTTGGAGCTGGCTAATGGAGAAGGGCAGAAGAATGAAGCAGCTTCGGTGGATTTGAGTCTTGGTGAGGAAAAATCAGCCCCAGATGGTTCTAAGGACTCAAAAACTGTGTCTTCCCCATCTGGGTCATCAAAAAGGTCTCGCCTTCAAAATGGATCACAGAACATGTGTTGTTCTGTTGATGGATGCAGTTCTGACCTCAGTGACTGTAGAGAGTACCACAGACGCCATAGGGTCTGTGAGAAGCACTCCAAAACCCCCGTTGTGTTGGTGGGGGGGAAGCAGCAGCGCTTCTGCCAGCAATGCAGCAGGTTTCATTCACTTGGGGAGTTTGATGAGGTTAAGAGGAGTTGTAGGAAACGCCTTGATGGCCACAACAGGCGCAGGAGGAAGCCTCAGCCACCCTCTCTTTTCATGGCTGCTGAGAAATTCATGTACAATTACAAAGGACCTAGAATCCTACACTTTGGCAGCCCGGAGGCATATGCCAACCCTATTATGAGAAACATGTGGCCTGCCACTGCAAAAACTGGAGCAGAATCTGGTTATGATCCTCCCCGGCTCTTATACAGAATTGACAAGCATAAGCAAGATAAGGGGCATCCTCTTTGGCAAGAAAATGACCCTAAAGTAGGCAATGGCAATGAAGCAATGCCTGGAACTCCCATATGTCAGCCTATTCATGGCACCGTTGCCCCATCAACGGGTGGAAAGAGCAGCCGAAAGCTCTCTTCTGATGCAAAACCTGGATCCTTTGACTCCGGTTGTGCTCTCTATCTTCTGTCAACACTTCAATCACAAAGTACAGAGTTGAGTATGGTGCAATCCAGCATCACCTGCCCAATGCAATCTCCCTCAGGCTCTGTGCATTTTGATGCCACCAACGAGTATGCTTGCTCAGAAACGGCAAAAGACAAGCCTAGTGGTCAAGTATTGGTTCTTGATGCAAACACAACCAACCTTCATTACAATGGAATGCTGCAAATGGAGCTGGATGGATTGGTTGAGAATGAAGACCCACTAACACTTCCCTTTCTCTGG 1080 0.4852 MDWDGKEFAWDPRGLELANGEGQKNEAASVDLSLGEEKSAPDGSKDSKTVSSPSGSSKRSRLQNGSQNMCCSVDGCSSDLSDCREYHRRHRVCEKHSKTPVVLVGGKQQRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPPSLFMAAEKFMYNYKGPRILHFGSPEAYANPIMRNMWPATAKTGAESGYDPPRLLYRIDKHKQDKGHPLWQENDPKVGNGNEAMPGTPICQPIHGTVAPSTGGKSSRKLSSDAKPGSFDSGCALYLLSTLQSQSTELSMVQSSITCPMQSPSGSVHFDATNEYACSETAKDKPSGQVLVLDANTTNLHYNGMLQMELDGLVENEDPLTLPFLW 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12944g00005 360 Gene3D - 62 132 IPR036893 GO:0003677|GO:0005634
Mupr12944g00005 360 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 25 296 IPR044817 GO:0003677
Mupr12944g00005 360 MobiDBLite consensus disorder prediction 45 66 - -
Mupr12944g00005 360 ProSiteProfiles Zinc finger SBP-type profile. 68 145 IPR004333 GO:0003677
Mupr12944g00005 360 Pfam SBP domain 71 144 IPR004333 GO:0003677
Mupr12944g00005 360 MobiDBLite consensus disorder prediction 1 66 - -
Mupr12944g00005 360 SUPERFAMILY SBT domain 69 150 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12944g00005 Mupr-Chr12944 19802 22382 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12944g00005 71 169 SBP-box Gene Family AT5G50670 66.667 2.42e-42 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mupr12944g00005 SBP 1.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12944g00005 - - gmx:100798317 682.559