Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12941g00004 ATGGCTTCGAGCGAGGGGTTTCTGACGGATGGGCAGAGGGAATTGCTAAAAATAGCTAGTCAAAATGCGGAGAATCTGTCTTCGTCGCCGAAATCTCCGTCATCCTTGCTTTCTGACCATCATGTAAAAGCCCCTGCTGGTGGTAAGGCACAAACCGCTGGGATAGCTGTGAGGCATGTGCGTCGGTCACACTCGGGAAAGTATGTGCGGGTGAAGAAGGATGGTGCTGGTGGTAAGGGCACTTGGGGGAAATTGCTTGATACTGATGTTGATTCTCACATAGACCGGAATGATCCAAATTATGATAGTGGCGAGGAACCCTATCAGCTGGTTGGATCTACCGTTACTGATCCCTTGGATGAATTCAAGAAAGCAGTGGTATCCATCATAGAGGAATATTTCAGTAATGGGGATGTGGATTTGGCAGCATCTGACCTCAGAGAACTTGGCTCAAGTGAATACTATCCTTACTTCATTAAACGCCTTGTGTCCATGGCAATGGACAGGCACGATAAAGAGAAAGAAATGGCTTCTGTTCTTCTTTCAGCATTGTATGCTGATGTCATCAGTCCTGCACAGATTAGGGATGGGTTTTTTATTCTTCTTGAATCTGCTGATGATCTTGCTGTGGATATACTGGATGCAGTTGACATCCTTGCATTATTCTTGGCACGTGCTGTTGTTGATGACATTCTTCCTCCAGCCTTTCTTGCCAGGGCAAGGAAGGCTCTTCCAGAATCTTCCAAGGGAGTTCAGGTAATCCAGACTGCTGAAAAGAGTTATCTCTCAGCTCCACACCATGCAGAACTTGTGGAAAGGCGATGGGGTGGTAGCACTCACATAACTGTTGAAGAAGTGAAGAAGAAGATAGCTGATTTACTTAGAGAATATGTGGATAGTGGTGACACATTGGAAGCCTGTAGGTGTATACGTGAATTGGGAGTTTCATTCTTCCATCATGAGGTTGTTAAGAGGGCCCTGGTACTTGCCATGGAGATTCGCACAGCAGAACCTCTAATGTTGAAGTTATTAAAAGAAGCAGCAGAAGAAGGACTAATTAGTTCCAGCCAAATGGTGAAAGGGTTTTCTCGTTTGGCAGAATCCCTAGATGATCTTGCGCTTGATATTCCATCTGCTAAGGCATTGTTTCAGTCATTTGTTCCCAAGGCAATATCTGAAGGATGGCTTGATGCTTCACTTACCAAACCTGCAGCTGAAGATGGGGAAATTCAAGTTGAAGATGAGAAGGTGAGGTATAAAATGGAAGCTGTAACTATAATTCATGAGTATTTTCTTTCTGATGACATTCCTGAACTGATCCGAAGTCTTGAAGATCTTGGAATACCCGAGTATAACTCAATATTTTTGAAGAAGCTGATAACTCTTGCTATGGACCGAAAGAACAGAGAAAAGGAAATGGCATCTGTACTGCTGTCTGCTCTTCATATAGAGATCTTCTCAACAGAGGATATAGTTAATGGTTTTGTCATGCTTCTGGAAAGTGCAGAAGATACTGCACTGGATATATTGGATGCTTCAAATGAGCTTGCTCTTTTTTTAGCTCGAGCTGTTATTGATGATGTATTGGCTCCACTGAATTTGGAAGAAATTGGCAGCAGGTTACCACCAAAATGCAGTGGTAGTGAAACTGTGCGTATGGCTCGGTCACTGATTGCTGCTCGTCATGCTGGGGAGAGGCTATTGAGATGCTGGGGTGGAGGGACAGGATGGGCTGTGGAGGATGCTAAGGACAAGATCATGAAGCTCTTGGAGGAGTACGAAAGTGGTGGGGTTGTGAGTGAAGCATGCCAGTGTATCCGTGACCTGGGAATGCCTTTCTTTAACCATGAGGTAGTGAAGAAAGCTTTGATTATGGCCATGGAGAAAAAGAATGATCGAATGCTAGATCTGCTGCAGGAGTGCTTTAGTGAAGGCCTGATCACCATTAATCAGATGACTAAAGGTTTCACCCGAATAAAGGATGGTCTTGATGATCTGGCTCTGGACATTCCAAATGCAAAGGAGAAATTTGGCTTCTATGTGGAGCATGCTCAGTCCAAGGGATGGCTTCTACCATCATTTGATTCGCCTGCCACAGATGTCTAA 2106 0.4449 MASSEGFLTDGQRELLKIASQNAENLSSSPKSPSSLLSDHHVKAPAGGKAQTAGIAVRHVRRSHSGKYVRVKKDGAGGKGTWGKLLDTDVDSHIDRNDPNYDSGEEPYQLVGSTVTDPLDEFKKAVVSIIEEYFSNGDVDLAASDLRELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPAQIRDGFFILLESADDLAVDILDAVDILALFLARAVVDDILPPAFLARARKALPESSKGVQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKIADLLREYVDSGDTLEACRCIRELGVSFFHHEVVKRALVLAMEIRTAEPLMLKLLKEAAEEGLISSSQMVKGFSRLAESLDDLALDIPSAKALFQSFVPKAISEGWLDASLTKPAAEDGEIQVEDEKVRYKMEAVTIIHEYFLSDDIPELIRSLEDLGIPEYNSIFLKKLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIGSRLPPKCSGSETVRMARSLIAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALIMAMEKKNDRMLDLLQECFSEGLITINQMTKGFTRIKDGLDDLALDIPNAKEKFGFYVEHAQSKGWLLPSFDSPATDV 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12941g00004 701 SMART ma3_7 419 530 IPR003891 -
Mupr12941g00004 701 SMART ma3_7 286 397 IPR003891 -
Mupr12941g00004 701 SMART ma3_7 122 233 IPR003891 -
Mupr12941g00004 701 SMART ma3_7 582 691 IPR003891 -
Mupr12941g00004 701 FunFam programmed cell death protein 4 408 562 - -
Mupr12941g00004 701 SUPERFAMILY ARM repeat 419 575 IPR016024 -
Mupr12941g00004 701 MobiDBLite consensus disorder prediction 1 54 - -
Mupr12941g00004 701 SUPERFAMILY ARM repeat 578 695 IPR016024 -
Mupr12941g00004 701 ProSiteProfiles MI domain profile. 285 406 IPR003891 -
Mupr12941g00004 701 Pfam MA3 domain 286 397 IPR003891 -
Mupr12941g00004 701 Pfam MA3 domain 583 690 IPR003891 -
Mupr12941g00004 701 Pfam MA3 domain 122 233 IPR003891 -
Mupr12941g00004 701 Pfam MA3 domain 420 529 IPR003891 -
Mupr12941g00004 701 PANTHER PROGRAMMED CELL DEATH 4 5 695 IPR039778 GO:0045892
Mupr12941g00004 701 SUPERFAMILY ARM repeat 119 279 IPR016024 -
Mupr12941g00004 701 ProSiteProfiles MI domain profile. 581 700 IPR003891 -
Mupr12941g00004 701 SUPERFAMILY ARM repeat 282 402 IPR016024 -
Mupr12941g00004 701 ProSiteProfiles MI domain profile. 418 539 IPR003891 -
Mupr12941g00004 701 ProSiteProfiles MI domain profile. 121 242 IPR003891 -
Mupr12941g00004 701 MobiDBLite consensus disorder prediction 15 36 - -
Mupr12941g00004 701 FunFam programmed cell death protein 4 113 264 - -
Mupr12941g00004 701 Gene3D - 114 262 - -
Mupr12941g00004 701 Gene3D - 407 562 - -
Mupr12941g00004 701 FunFam Programmed cell death protein 4 271 407 - -
Mupr12941g00004 701 Gene3D - 569 696 - -
Mupr12941g00004 701 Gene3D - 272 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12941g00004 Mupr-Chr12941 11602 17247 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12941g00004 585 681 Eukaryotic Initiation Factors Gene Family AT5G57870 33.000 9.04e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12941g00004 - - gmx:100809081 1291.17