Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12940g00001 ATGTTCATTATGCTTTTGTTGCTCTCTAACTTTCTAATCCAAACTCAAATTGGTGCAACCACTGTGGCAGATCCCAACACTTTCTCCTTTGTTTCTTTCACTCCTGAAAGTTGCACCAATGGTGAGTTGCTTTGCATGGGTTCAGCCACTGCTGGCAATGGGTATTTGAGTCTCACCCCAGAGCCACAACAAAGCAGCAATTCAAGTTCAGCATTATCTAACACAACCAACAAAGTGGGAAGGGTTTTGTACCCTCATCCTGTGCATGTTTGGCCAGCAATTATCTCTACCACATTCACTCTTAGGATCACTCCTTTTGCAGAAAATTCAACCAGCTCTGGAGATGGAATGGCACTAGTGTTTGCACAAGATAATAGGCCATCACCAAATGATAGCTATGGCTCGTATCTTGGCATGTTTGATCGGTCTACACAAGGTGGGGATTTTCAACAAATTGCTGTGGAGATGGACACTTTCATGAATGAATTTGATCCAGATGGAAACCACATTGGAGTAGTCACAACCAGCATCACAAATCCACTTGCATCTGAGAGTCTCAATAGCACTGGAATTGACCTTAAAAGTGGAAGAGACATTGAGGTCAAAGTTGACTATGATGGATGGAGTAAAATGATATTTGTCTCTGTGGGATACTCTGAAAGCCAATTGAAGAGTGTCCTTAACTGTTCAATTAACCTTCCTGACATAATTCCAAGCTCCATTTATGTAGGCTTCACAGCCTCCACAGGCAACACTTTTCCTGAAAGCCATCAGGTCCTCAATTGGGTCTTCACATCAGTGCCACTGCCTATTGTTTCTGCTGACCTTGAACCCACTAAAGTTGGCACCTTCAGGACCATGAGAAGATATGTGAGGGGTAACAAGAAGAAGGATATAGAAAGCCTATCAAAGAAGGCTGCAGATATCCCCAAGGTCTTCACTTACAAGCAACTATCAAAGGCCACTTTCAACTTCAGCAAGGAAAATCTTTTGGGCAGAGGTGCATTTGGTAGTGTTTATAAAGGCACCTTATTGTACTCTGGAAAAACTGTAGCAGTAAAGAAGATTTCAGCAACTTCTAAGCAAGGTGAAAGAGAGTTCTTAGCTGAAATACGTACCATAGGGCGTCTTAGGCACAAAAACTTAGTGAAGCTCCAAGGGTGGTGCAGTGAAGGCAAGAATCTTCTCTTGGTTTATGATTACATGGAAAATGGAAGCCTTGATCACTTCATAGGCAAGGGCATTCTGAACTGGCAAACAAGGCACAAGATATTGACAGGATTGGCATCAGCATTACATTACCTTCATGAAGAATGTGGAAGCCCTGTTGTCCACAGAGATGTTAAGCCTAACAATGTCATGCTGGACTTCAATCACAATGCTCAATTAGGAGATTTTGGTCTAGCAAGATTACTCAAAAATGATGGTTCAGTGACTACAAATCTAAATGGAACTCTAGGATATTTGGCTCCTGAACTAAGCTTCACAGGGAAAGCTACACCTGAGTCAGATGTGTATAGCTTTGGAATGGTAGTACTTGAAGTCATATGTGGGAAAAGGTTAAACTGGATTAAGCAAGGGAACAGTTTTGTGGATTATGTGTGGAATTTGCATGCTCAAAATGAATTGCTAGAGTGTGTAGACAAACGGCTAGAGAACAATTTTGATGAGGAAGAAGCTCAAAGGGCATTGATGGTTGGATTGGCATGTTTGCATCCTGATTCCATGTTCAGGCCAAGGATGAGAAAAGTGGTGAACATTTTTCAGAACTCAAATGAACCTTTAATGGAATTACCAGGAGTGAGGCCCACTGGAGTTTATCTATCAGTTTCTTCTGCTTCATCATCCTCTAACTTTGGCTCTAGGGGTGAGTTACAGCTCCAATCATCCACAAAATCATAA 1902 0.4185 MFIMLLLLSNFLIQTQIGATTVADPNTFSFVSFTPESCTNGELLCMGSATAGNGYLSLTPEPQQSSNSSSALSNTTNKVGRVLYPHPVHVWPAIISTTFTLRITPFAENSTSSGDGMALVFAQDNRPSPNDSYGSYLGMFDRSTQGGDFQQIAVEMDTFMNEFDPDGNHIGVVTTSITNPLASESLNSTGIDLKSGRDIEVKVDYDGWSKMIFVSVGYSESQLKSVLNCSINLPDIIPSSIYVGFTASTGNTFPESHQVLNWVFTSVPLPIVSADLEPTKVGTFRTMRRYVRGNKKKDIESLSKKAADIPKVFTYKQLSKATFNFSKENLLGRGAFGSVYKGTLLYSGKTVAVKKISATSKQGEREFLAEIRTIGRLRHKNLVKLQGWCSEGKNLLLVYDYMENGSLDHFIGKGILNWQTRHKILTGLASALHYLHEECGSPVVHRDVKPNNVMLDFNHNAQLGDFGLARLLKNDGSVTTNLNGTLGYLAPELSFTGKATPESDVYSFGMVVLEVICGKRLNWIKQGNSFVDYVWNLHAQNELLECVDKRLENNFDEEEAQRALMVGLACLHPDSMFRPRMRKVVNIFQNSNEPLMELPGVRPTGVYLSVSSASSSSNFGSRGELQLQSSTKS 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12940g00001 633 ProSitePatterns Protein kinases ATP-binding region signature. 331 355 IPR017441 GO:0005524
Mupr12940g00001 633 PANTHER - 66 592 - -
Mupr12940g00001 633 SUPERFAMILY Protein kinase-like (PK-like) 309 615 IPR011009 -
Mupr12940g00001 633 SMART serkin_6 325 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12940g00001 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Mupr12940g00001 633 Pfam Legume lectin domain 27 267 IPR001220 GO:0030246
Mupr12940g00001 633 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 267 IPR013320 -
Mupr12940g00001 633 FunFam Putative L-type lectin-domain containing receptor kinase S.7 24 279 - -
Mupr12940g00001 633 CDD STKc_IRAK 331 585 - -
Mupr12940g00001 633 FunFam probable L-type lectin-domain containing receptor kinase S.5 310 401 - -
Mupr12940g00001 633 CDD lectin_legume_LecRK_Arcelin_ConA 28 266 IPR001220 GO:0030246
Mupr12940g00001 633 MobiDBLite consensus disorder prediction 612 633 - -
Mupr12940g00001 633 Gene3D - 24 273 - -
Mupr12940g00001 633 Gene3D Phosphorylase Kinase; domain 1 284 401 - -
Mupr12940g00001 633 Coils Coil 541 561 - -
Mupr12940g00001 633 Pfam Protein kinase domain 326 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12940g00001 633 ProSiteProfiles Protein kinase domain profile. 325 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12940g00001 633 Gene3D Transferase(Phosphotransferase) domain 1 402 597 - -
Mupr12940g00001 633 FunFam probable L-type lectin-domain containing receptor kinase S.5 402 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12940g00001 Mupr-Chr12940 3897 7158 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12940g00001 23 604 Receptor kinase-like Gene Family AT5G55830 37.730 7.22e-119 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mupr12940g00001 Pkinase 4.2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12940g00001 - - gmx:102665030 1052.74