Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12918g00001 ATGGTTACCTTGCCCCGCACAAAGGTTTGTGGCAGAAAAACACTACTAAGTGAAAGAGATTTGACATTGAGGCAGAGAGAGAAAGAGAAATCCAAAGCCTTTGGACTTTTCTTTCACCGCCCACCACCACAACACAAAGAAACAAGGAAATCTTTCGTCTCAAAGAGGCAGCAAGACCCTAGGGAAATGATAGAGGAAGATCAAGGACAGTGTTCTTCTCAAGCGATCAACAACTACCACCAGGCATATCAAGAGCAGCTTCTCCTTCAGCAACAGATGCAGCAACAAAACAATGATATCTTCGGTGGAGGATTGAATATGTACCCTGGTGAAGTGTCTCCAATCATGCATCAACCATGGTCCATGCCTCATCATCAGGTACATCACCACCACCACCACCACCCCTTCAACCCGGTGAGAGAGCACGACCCTTTTCTCGTCCCTCCCCAGCCTTCACCCTATGCAACTTTGTTCAACAGAAGGGGTTCCTCTCTTCAGTTTGCATACGATGGTTCATCTTCCGACCATCTTAGGATCATATCCGATACCCTTGGACCGGTGGTTCAACCCGGTTCGGCACCCTTTGGCCTCCAAGCCGAGCTTGCCAAGATGACTGCCCAAGAAATCATGGAGGCTAAGGCCCTTGCAGCATCCAAGAGTCACAGTGAAGCTGAAAGGAGACGCAGAGAGAGAATCAATAACCATCTTGCCAAGCTCCGTAGCTTGTTGCCTAGCACAACCAAAACAGATAAAGCATCATTGCTAGCAGAAGTGATTCAGCATGTGAAGGAGCTGAAGCGTCAAACCTCGTTGATAGCAGAATCTAGTCCGGTTCCTACTGAAGCTGATGAGTTAACGGTAGTGGACGAAGCTGATGAAGATGGCAACTCTGTGATCAAAGCCTCGCTGTGCTGTGAAGATAGGTCAGATCTGTTCCCTGAACTCATAAAGACCTTGAAAGCGTTGGGGTTAAGAACCCTTAAAGCTGAGATCACAACGCTGGGTGGCCGCGTCAAGAACGTTTTGTTCATAACTGGGGAAGAAGCAGACTCAAGCAGTGGCAGCGAGGACCATAGCCACCACCAACACTACTGCATTAGCTCAATACAAGAAGCGCTTAAGGCGGTGATGGAGAAGAGCGTTGGGGATGAATCTGCTTCTGCTAATATTAAGAGACAAAGGACCAACATAATATCCATGTCCTAG 1206 0.4801 MVTLPRTKVCGRKTLLSERDLTLRQREKEKSKAFGLFFHRPPPQHKETRKSFVSKRQQDPREMIEEDQGQCSSQAINNYHQAYQEQLLLQQQMQQQNNDIFGGGLNMYPGEVSPIMHQPWSMPHHQVHHHHHHHPFNPVREHDPFLVPPQPSPYATLFNRRGSSLQFAYDGSSSDHLRIISDTLGPVVQPGSAPFGLQAELAKMTAQEIMEAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAESSPVPTEADELTVVDEADEDGNSVIKASLCCEDRSDLFPELIKTLKALGLRTLKAEITTLGGRVKNVLFITGEEADSSSGSEDHSHHQHYCISSIQEALKAVMEKSVGDESASANIKRQRTNIISMS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12918g00001 401 CDD ACT_UUR-ACR-like 302 377 - -
Mupr12918g00001 401 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 216 265 IPR011598 GO:0046983
Mupr12918g00001 401 MobiDBLite consensus disorder prediction 42 64 - -
Mupr12918g00001 401 PANTHER TRANSCRIPTION FACTOR BHLH30 94 397 IPR045847 GO:0003700|GO:0006355
Mupr12918g00001 401 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 220 272 IPR036638 GO:0046983
Mupr12918g00001 401 SMART finulus 222 271 IPR011598 GO:0046983
Mupr12918g00001 401 MobiDBLite consensus disorder prediction 37 64 - -
Mupr12918g00001 401 Pfam Helix-loop-helix DNA-binding domain 219 265 IPR011598 GO:0046983
Mupr12918g00001 401 Gene3D - 211 272 IPR036638 GO:0046983
Mupr12918g00001 401 FunFam transcription factor bHLH30 211 274 - -
Mupr12918g00001 401 CDD bHLH_AtAIG1_like 211 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12918g00001 Mupr-Chr12918 2235 4971 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12918g00001 72 394 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 55.367 7.30e-101 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr12918g00001 HLH 2.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12918g00001 - - gmx:100799872 513.457