Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1290g00003 ATGGGTGACCCATATGGGTTGCCGGAGGATCTCCGGCGGCTTATATCAGCCAGACCCCACTTAAGCCCTTCCAACAGCCACCTCCTGGAGCCACTCTGCGTTCACCACGGTCTTAGTGCTGTTAGTGCTCCTCCACCCAACACCACCTACGACCCCAACATGGTTGGAGACGTTTTCTTCCCTCGTGCCTTCACTCACTTTTCTCATCACGACTATTCTTCTTCCTCTGGCGTCAACCCCACTACTGCTGCTACTGCCTCCGATCATGCATTCTGCAGCATAGAGAGTCAAGATAAAGGGTGGTTTGGCTTTGATTCCGGGAACAACAGGTGGCCTAGGCAGGAGACTCTTTCGCTTCTGGAGATCAGATCTCGTCTTGATTCCAAGTTCAGAGAGAACAATCAGAAAGCACCCTTGTGGAATGATATCTCTAGGATAATGGCTGAGGAATTTGGGTACCAAAGAAGTGGAAAAAAATGCAAAGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAAGACCAAGGAAGGTAAAGCTAGTAGACAAGATGGGAAACACTACAGGTTCTTCAGGCAGCTTGAGGCAATATGTGGAGATCAAGCAAACACTACTCATGCCTCAGCTTCAGATAAAACCCATCGTGCTGGTGGAAACGCTGCTAGTATTCAAACACAAAACTTCACAATCAACCAAGACCATAATGGTGATTCTAATAATAACCCCAAGTGCTCGGAGAGCCTCAGCATCTCAAATTCATCTGAATTCGAGACATCCTCGTCTGAAAACAACGAAGAGGATCTTTCAGCCATTGCATTCATGATGAAGCAGTCAAGGGAGAAGCAGAAAGGGTTGGATCAAAGGCAAGGTGATCATAGGAGGGTAAGAAAAAGTTGGAGGGCTAAAGTGGAGGAGATTGTGGATTCCCACATGAGGAAGATCATAGAGACTCAAGATGCTTGGATGGAGAGAATGTTGAGTGTTGTTGAGCAAAGAGAGCAAGAGATGGCATCTAAGGAGGAAGAAAGGAAGAGAAAAGAGTCAATGTGGTTTGACCAACAGGTGCATGAACTGTGGGCTAAAGAGAAAGCATGGGTTGAAGCAAGAGATGCTGCACTGATAGAGGTTGTGAGGAAACACATTGGAATAGGACTTGAAGCATTGCCATTGGATGAAGCTATGGTTGAAGAACCACCAAATAAGAACAAGAGCCAGGGAATTAGTATTGATGCCAATGAATTTCCCTCTGAGGGTGTTGATCATGGAAGTAGTAGGTGGACAGAAATGGAGATTTCAAATTTGATACAGCTAAGGACTGGTTTTGAACAACGATTCAGGGAAAATGGGTACTTGGAGAATGGGCTTTGGGATGAAATAGCAGCAAAACTGGCTTGTGTGGGGTTTGATAGGAGCGCAAGTGAGTGCAAGCAAATATGGGATGAGATCAGCATCTCTCTCAGAAGGACAGTGGAGTGTGATGGTGCCAAAAGAAGGCCTTGGTATTTGGGACTTAAGCTTACGGATGATGATGATCTTTGA 1536 0.4557 MGDPYGLPEDLRRLISARPHLSPSNSHLLEPLCVHHGLSAVSAPPPNTTYDPNMVGDVFFPRAFTHFSHHDYSSSSGVNPTTAATASDHAFCSIESQDKGWFGFDSGNNRWPRQETLSLLEIRSRLDSKFRENNQKAPLWNDISRIMAEEFGYQRSGKKCKEKFENLYKYYKKTKEGKASRQDGKHYRFFRQLEAICGDQANTTHASASDKTHRAGGNAASIQTQNFTINQDHNGDSNNNPKCSESLSISNSSEFETSSSENNEEDLSAIAFMMKQSREKQKGLDQRQGDHRRVRKSWRAKVEEIVDSHMRKIIETQDAWMERMLSVVEQREQEMASKEEERKRKESMWFDQQVHELWAKEKAWVEARDAALIEVVRKHIGIGLEALPLDEAMVEEPPNKNKSQGISIDANEFPSEGVDHGSSRWTEMEISNLIQLRTGFEQRFRENGYLENGLWDEIAAKLACVGFDRSASECKQIWDEISISLRRTVECDGAKRRPWYLGLKLTDDDDL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1290g00003 511 FunFam trihelix transcription factor PTL-like 111 173 - -
Mupr1290g00003 511 Pfam Myb/SANT-like DNA-binding domain 109 196 IPR044822 -
Mupr1290g00003 511 Pfam Myb/SANT-like DNA-binding domain 423 496 IPR044822 -
Mupr1290g00003 511 Coils Coil 321 348 - -
Mupr1290g00003 511 ProSiteProfiles Myb-like domain profile. 109 168 IPR001005 -
Mupr1290g00003 511 ProSiteProfiles Myb-like domain profile. 417 482 IPR001005 -
Mupr1290g00003 511 CDD GT1 423 488 - -
Mupr1290g00003 511 PANTHER FI21293P1 75 498 - -
Mupr1290g00003 511 MobiDBLite consensus disorder prediction 229 263 - -
Mupr1290g00003 511 SMART sant 421 484 IPR001005 -
Mupr1290g00003 511 SMART sant 107 170 IPR001005 -
Mupr1290g00003 511 Gene3D - 425 487 - -
Mupr1290g00003 511 Gene3D - 111 173 - -
Mupr1290g00003 511 CDD GT1 109 175 - -
Mupr1290g00003 511 FunFam Trihelix transcription factor GT-2 425 487 - -
Mupr1290g00003 511 MobiDBLite consensus disorder prediction 396 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1290g00003 Mupr-Chr1290 18811 21188 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1290g00003 110 497 Trihelix Transcription Factor Family AT5G03680 44.307 7.51e-88 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mupr1290g00003 Myb_DNA-bind_4 8.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1290g00003 - - gmx:100787750 830.861