Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12904g00001 GCGTTGCGTAGAAACGCACGTGTCGCCACTCGTGATTCAGTAGTCTCTGGCTCTCCGTCTCAAATCTCGCGCATCTTTATATTTCCAGTACTATATATTCATTTCTTCGCTGTTCCTCACACTCGTGAGAGCCACAGTGCTGTCTTACTTCGCTGTCCCAGTTGCTCCATTGTAGAGAGAGAAACACTTTTTCAACTCTCTCTCTCTCTCTCTAACATGGCCGAAGAACCAATGCCCACGCGCTGGTCTTTCCAGGACTTTAAATTGTATTATGATGCTAAGTTCGGTAGGAAGAAAGCTTTGAAGAATGGCGAGACTGATGATAAAGTGGTCAGTAATGGAGATTCCTTGGGCTTTGCATCCAATGGCAATCTGCATGCCAAAAGGGCATCGGATATGGCTGTTTATGAGCAGTTTCAAAGCGAGGGGCAGAATCAGACTCACACAAATGGTTTTTCGCCGGTCAATATGGATGGAAGGCCGCAGAAGTCTTTGCTTCCACCTTTTGAATCTGCAGAAATGCGAACTTTAGCCGAGAGCCTAAGTAGGGATATCATTCGTGGAAGTCCGGATGTGAAGTGGGAAAGCATCAAGGGGTTAGAGAATGCCAAACGTTTACTGAAAGAGGCTGTTGTGATGCCAATTAAGTATCCCAAGTACTTCACTGGTCTGTTATCACCATGGAAAGGCATCCTCCTTTTTGGCCCACCGGGGACAGGAAAGACAATGCTTGCAAAGGCAGTTGCAACAGAGTGCAAGACTACTTTTTTTAATATTTCAGCATCATCTGTATTAGTGAAAGTGTTATTTGAACTTGCAAGGCATCATGCACCCTCAACAATATTTCTTGACGAAATTGATGCAATCATTAGTCAACGAGGTGAAGCTCGCAGTGAACATGAAGCAAGTAGACGGTTGAAAACTGAGCTTCTCATTCAGATGGATGGTTTGACGCGGACAGATGAACTGGTTTTTGTTTTAGCGGCAACAAATCTTCCCTGGGAATTGGATGCAGCCATGCTCCGACGTCTTGAGAAGCGAATCCTAGTACCACTTCCAGAACCAGAAGCGAGAAGAGGGATGTTTGAGGAACTCCTTCCTCCACAGCCCGACGAGGAACCAATTCCGTATGATTTACTGGTGGAACAGACAGAAGGATTTTCGGGCTCAGATATCCGATTACTCTGTAAAGAGACAGCAATGCAGCCCTTGAGACGCTTGATGTCACAACTTGAGCAGACTCAGGAGGTGCTGCCTGAAGAAGAGTTGCCAAAAGTTGGGCCAATTAGATCTGAAGATATAGAGACAGCTTTGAAAAACACAAGGCCATCTGCTCATCTCCATGCCCACAAATATGACAAGTTCAATGCTGATTATGGTAGTCAAATACTACACTGA 1398 0.4535 ALRRNARVATRDSVVSGSPSQISRIFIFPVLYIHFFAVPHTRESHSAVLLRCPSCSIVERETLFQLSLSLSNMAEEPMPTRWSFQDFKLYYDAKFGRKKALKNGETDDKVVSNGDSLGFASNGNLHAKRASDMAVYEQFQSEGQNQTHTNGFSPVNMDGRPQKSLLPPFESAEMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPEARRGMFEELLPPQPDEEPIPYDLLVEQTEGFSGSDIRLLCKETAMQPLRRLMSQLEQTQEVLPEEELPKVGPIRSEDIETALKNTRPSAHLHAHKYDKFNADYGSQILH 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12904g00001 465 FunFam Katanin p60 ATPase-containing subunit A1 189 358 - -
Mupr12904g00001 465 Pfam AAA+ lid domain 378 413 IPR041569 -
Mupr12904g00001 465 Gene3D - 353 441 - -
Mupr12904g00001 465 FunFam Katanin p60 ATPase-containing subunit A-like 2 353 441 - -
Mupr12904g00001 465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 446 IPR027417 -
Mupr12904g00001 465 PANTHER AAA DOMAIN-CONTAINING 137 461 - -
Mupr12904g00001 465 SMART AAA_5 227 354 IPR003593 GO:0016887
Mupr12904g00001 465 Gene3D - 190 455 IPR027417 -
Mupr12904g00001 465 Pfam ATPase family associated with various cellular activities (AAA) 231 351 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12904g00001 Mupr-Chr12904 12257 22833 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12904g00001 225 424 Calmodulin-binding Proteins AT3G56690 35.455 2.02e-26 111