Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12900g00003 ATGGACAATTATGGGTCTTCTTCACATCCATATGGGTATCCAAAACCTTATCCAAACCCTTACCCTGGCGACACCCCTCCATATCCTCCACCTGATCCCTATGCAGCTTCACCATATCCACCAAACCCTCCACATTCCTATCCCCCACCTCCTCCACCACACTCCTCAACCCCTTATTTTAGCCACATAGACTATTCCTCATACCCCCCACCACCTCCCCCAACTACCTCATCACATGGCTCCTTTGATTTTCACATGCCTCAGCCACCTCACACTTATCCTTACCCTCCATCAGAATGGAGTGCTACAGGAGGTGCAGTGTCTGATACTAGTGATAGTTTTAACCCTCATCACTATTATGCTTACCCTCCTCACTCTTCTGCTTACCCTCCTCTGGATGATCTCATGAGCAATGTTAAGCTGTCTGATAATAACCTCCCAAGTGCACCTCCAGCTCCAATGTTGAGACATTCCAATTCAATTTCAATTTCAAATCATGAGAGGAGAGATGAGTTTTATGACTATCCTAGCAACTCCTCCTCAAATTTGGATCAGGGGGATTATTCTAGACATTCACCTCATTCTGATGAATCAGTGCATAATCAGAGCTTGCAGATTGTGCCGGTTCAGAGCAAAGGGTCTCTCAGAGTTCTGCTCCTGCATGGGAATTTAGATATCACGGTTCATGGAGCCAAACACCTTCCAAACATGGACATGTTCCACAAAACTTTGGGGGATGTGTTTGGGAGATTGCCTGGGAATGTGAGCAGCAAGATTGAGGGAACGGTGAGTCGGAAGATTACTAGTGATCCTTATGTGACAATTTCTGTGTCAAATGCTGTGATTGGGAGGACTTTTGTGATTAGCAACAGTGAGAATCCTGTGTGGGAGCAACATTTCTATATTCCTGTTGCACATCATGCTGCTGAAATTTACTTTATTGTCAAGGACAGTGATGTGGTGGGCTCGCAGCTCATTGGCATTGTGGCAATTCCTGTGGAACAAATATACTCAGGGGAAAAGGTACAAGGGACCTACCCTATCCTGAATAACAATGGGAAGCCTTGTAAGCCGGGTGCTGCCTTGACCGTATCCATTCAGTACATTGCAATGGAGAAACTTATCATTTATCATCAAGGAGTTGGAGCTGGTCCTGACTACATTGGGGTTCCTGGCACATATTTTCCATTGAGGAAAGGTGGAACGGTTACTCTATATCAAGATGCTCATGTTCCAGATGGTTGCCTCCCTAATGTTGTGCTTGACCATGGCATTTATTATGCTCACGGGAAGTGCTGGTTTGACATCTTTGACGCCATTCGTCAAGCTCAGCGTTTGGTTTACATTACAGGGTGGTCGGTTTGGCACAAAGTTAGGTTGGTAAGGGATGCTGGCGATGCATCAATATTCACCCTCGGTGATCTGCTGAGGTCTAAGTCACAGGAGGGAGTAAGAGTGCTTCTCCTTGTCTGGGATGACCCTACATCAAGAAGCATTCTTGGTTACAAAATGGATGGTGTAATGGCAACTCATGATGAGGAAACTAGACGATTTTTCAAGCACTCTTCTGTGCAAGTGCTGCTCTGTCCTCGATATGCTGGAAAACGACATAGCTGGGCCAAACAAAAGGAAGTTGAAACAATATATACACATCATCAGAAAACTGTAATTGTTGATGCTGACGCTGGAAATGACAAAAGAAAAATTGTAGCATTTGTTGGTGGACTTGATTTGTGTGATGGGCGATATGATACTCCCAACCATCCTCTCTTTAGGACACTGCAGACACTGCATAAGGATGACTTTCACAACCCTACTTTCACGGGTAATACTGGTGGTTGTCCAAGGGAGCCGTGGCATGACTTGCATTCTAAAATTGATGGTCCAGCAGCTTACGATGTCTTGACCAACTTTGAGGAGCGATGGGCAAGAGCTGCAAATCCTAAAGGGATTAAAAAGTTGAGGAGTTCATATGATGATGCATTGCTTAAGCTAGACAGAATCCGAGATATTATCAGTCCATCTAATATTAGTGTTGGTGATGATAATCCTGGATCATGGCATGTTCAGATATTCCGTTCAATTGATTCAAATTCTGTTAAGGGGGGATTTCCAAAGGAGCCAAAAGATGCATCAAACAAGAACCTAGTATGTGGAAAGAATGTGCTGATTGACATGAGCATACATACAGCATATGTAAAGGCAATTCGTGCTGCACAACATTACATTTATATAGAGAATCAATATTTCATTGGGTCTTCATTTAATTGGAGTCAACATAAAGACCTTGGTGCTAATAATTTAATTCCGATGGAAATTGCACTGAAGATCGCTGCTAAGATAAGGGCAAATGAGAGATTCGCAGTGTACATTGTTATTCCAATGTGGCCGGAGGGTGTTCCAACAGGTGCTGCCACCCAAAGAATTCTATTTTGGCAGAATAAAACAATGCAAATGATGTACGAGACAATTTACAAGGCTTTGGTTGAAGTTGGGCTTGAAACAGCATTCTCTCCGCAAGACTATTTGAACTTTTTCTGTCTTGGAAATCGGGAGGCCGTAGATATGTATGAGAACATCACTGTGTCCGGAAATCCTCCGCCAGCAAATAGTCCACAAGCAATTAGTAGAAACAATCGACGTTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTCATATTGGGGTCTGCAAACATCAACCAGCGTTCTATGGAAGGAACAAGGGACACCGAGATTGCAATGGGAGCCTATCAACCTCATCATACCTGGGCAAGAAGACAGTCTTATCCACATGGAGAGATCCATGGATATAGGATGTCACTTTGGGCAGAACATACGGGTACTATTGAAGACTGCTTCTTACAACCAGAGAGCCTTGAATGTGTCAGAAGGGTTAGAACAATGGGTGAAATGAACTGGAAACAATTTGCATCAAGTGATGTAACAGAGATGAGAGGGCATCTGCTGAAGTACCCGGTAGAAGTCAATCGAAAGGGTAAGGTAAAATCTCTTCCCGGCCATGAAGAGTTCCCGGATGTGGGAGGAAAGATTGTAGGATCATTTATTGCCATTCAAGAGAATCTAACCATTTGA 3111 0.4356 MDNYGSSSHPYGYPKPYPNPYPGDTPPYPPPDPYAASPYPPNPPHSYPPPPPPHSSTPYFSHIDYSSYPPPPPPTTSSHGSFDFHMPQPPHTYPYPPSEWSATGGAVSDTSDSFNPHHYYAYPPHSSAYPPLDDLMSNVKLSDNNLPSAPPAPMLRHSNSISISNHERRDEFYDYPSNSSSNLDQGDYSRHSPHSDESVHNQSLQIVPVQSKGSLRVLLLHGNLDITVHGAKHLPNMDMFHKTLGDVFGRLPGNVSSKIEGTVSRKITSDPYVTISVSNAVIGRTFVISNSENPVWEQHFYIPVAHHAAEIYFIVKDSDVVGSQLIGIVAIPVEQIYSGEKVQGTYPILNNNGKPCKPGAALTVSIQYIAMEKLIIYHQGVGAGPDYIGVPGTYFPLRKGGTVTLYQDAHVPDGCLPNVVLDHGIYYAHGKCWFDIFDAIRQAQRLVYITGWSVWHKVRLVRDAGDASIFTLGDLLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMATHDEETRRFFKHSSVQVLLCPRYAGKRHSWAKQKEVETIYTHHQKTVIVDADAGNDKRKIVAFVGGLDLCDGRYDTPNHPLFRTLQTLHKDDFHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDVLTNFEERWARAANPKGIKKLRSSYDDALLKLDRIRDIISPSNISVGDDNPGSWHVQIFRSIDSNSVKGGFPKEPKDASNKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSFNWSQHKDLGANNLIPMEIALKIAAKIRANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETIYKALVEVGLETAFSPQDYLNFFCLGNREAVDMYENITVSGNPPPANSPQAISRNNRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPHHTWARRQSYPHGEIHGYRMSLWAEHTGTIEDCFLQPESLECVRRVRTMGEMNWKQFASSDVTEMRGHLLKYPVEVNRKGKVKSLPGHEEFPDVGGKIVGSFIAIQENLTI 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12900g00003 1036 FunFam Phospholipase D 694 928 - -
Mupr12900g00003 1036 CDD C2_plant_PLD 217 369 - -
Mupr12900g00003 1036 FunFam Phospholipase D delta 423 661 - -
Mupr12900g00003 1036 Gene3D C2 domain 217 357 IPR035892 -
Mupr12900g00003 1036 Pfam C2 domain 222 348 IPR000008 -
Mupr12900g00003 1036 FunFam Phospholipase D delta 217 364 - -
Mupr12900g00003 1036 MobiDBLite consensus disorder prediction 171 201 - -
Mupr12900g00003 1036 Gene3D Endonuclease Chain A 685 936 - -
Mupr12900g00003 1036 SUPERFAMILY Phospholipase D/nuclease 708 968 - -
Mupr12900g00003 1036 Gene3D Endonuclease Chain A 426 664 - -
Mupr12900g00003 1036 MobiDBLite consensus disorder prediction 1 88 - -
Mupr12900g00003 1036 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 547 582 IPR001736 GO:0003824
Mupr12900g00003 1036 SUPERFAMILY Phospholipase D/nuclease 427 646 - -
Mupr12900g00003 1036 MobiDBLite consensus disorder prediction 140 159 - -
Mupr12900g00003 1036 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 220 369 IPR035892 -
Mupr12900g00003 1036 Pfam Phospholipase D C terminal 956 1026 IPR024632 -
Mupr12900g00003 1036 ProSiteProfiles C2 domain profile. 211 346 IPR000008 -
Mupr12900g00003 1036 SMART C2_3c 223 345 IPR000008 -
Mupr12900g00003 1036 MobiDBLite consensus disorder prediction 13 57 - -
Mupr12900g00003 1036 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 882 909 IPR001736 GO:0003824
Mupr12900g00003 1036 PANTHER PHOSPHOLIPASE D 214 1026 IPR015679 -
Mupr12900g00003 1036 SMART pld_4 882 909 IPR001736 GO:0003824
Mupr12900g00003 1036 SMART pld_4 547 582 IPR001736 GO:0003824
Mupr12900g00003 1036 Pfam Phospholipase D Active site motif 548 582 IPR001736 GO:0003824
Mupr12900g00003 1036 Pfam Phospholipase D Active site motif 883 909 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12900g00003 Mupr-Chr12900 19367 27380 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12900g00003 5 1036 Phospholipase D Gene Family (Wang group) AT2G42010 67.631 0.0 1421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12900g00003 K01115 - gmx:100805294 1710.27