Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12890g00001 ATGAAGAATGCCGTGGCAAGTACTGCTGCGAGACTTCCCTGCCATCAATATACCACAAAAATTGAAGATTTAAATGAGAATCAAACGGGTCATCAGTGCAGTTTCGCGATGCTTGTAGAAGATTATCGCTACACTTTGTACAACTCCGACCACTTCTATCTTCGTGTCGCTGACAACCTAAATAATGTCCCTGCGGTGCTTGAGTGGGAGATTGTGAACAATTTAACCCATAAACTCCCTGCAGATAAATATGCTAACTGCTATGCCACCAATGTTACATCTTCACAGTATAAACACTCAGGTCAGAGATGTACCTGCGTCTATGGCTTTGATGGCAATCCCTACATTGCTGGAGGTTGTCGAGCTACTTCAGGTTTGGACCACCAAAGGACTTATTTGGATTCGTACTACCAGAAGACAAGTCCAGCAAAGTCGGTCATCATAATAGGACTTTTTGCAAGCCTTGGATCCATCATTTTACTCCTTATATTATGGTGGTTGTATAAAGTTGTAAGTGAAAGCATTGTGAAGAAACGTAAAGAAAAATTCTTCAAACGAAATGGAGGATTATTGTTAGAACAAAGATTTTCTTCTGGCGAAGTTAACGTTGATAAAGTTAAACTATTTAGCTTAAACGACTTGGAGAAGGCCACCGACCACTTTAATATGAACAGAGTGCTTGGAAATGGAGGTCAAGGTACCGTTTACAAAGGCATGTTAATAGATGGAAAAATTGTTGCAGTGAAAAAGTTCAAGGTCGAAGGAAAGGTCGAAGAATTTATCAATGAATTTGTCATTCTTTCACAAATTAACCATAGAAACGTGGTTAAGTTGTTAGGAAGTTGTTTGGAGACTGAAATTCCTTTACTTGTTTATGAATTCATTCCTAATGGTAACCTTTTTGAGTATTTGCACAAACAAAATGAGGACTTACCAATTACATGGGATATGCGTTTGAGGATTGCCATTGAAGTTGCTGGAGCTTTATTTTACTTACACTCAGCTGCTGCTCAGCCTATTTATCATAGAGACATAAAGTCCACAAATATACTATTGGATGAAAAGTATAATGCAAAAGTAGCAGACTTTGGTACATCAAGAATGGTTTCCATTGAAGCTACTCACCTCACTACAGTAGTTCAAGGAACTTTTGGATACTTGGACCCTGAATATTTCCATACTAGTCAATTTACAGAGAAGAGTGATGTCTACAGTTTTGGAGTAGTTCTTGTTGAACTCTTAACAGGGCAAAAGCCAATATCCTCTCTAAGACCAGAGGAAGCCAGGAGTTTAGCTTCGTATTTCATTCTATGTATGGAGGAAAATCGGTTGTTTGATATTATTGATGAAAGAGTCATAGAGGAGGGGAAGAGAGAACACATCATTGCAGTTGCCATTCTTGCAAGTAGATGTTTAGAGTTGCATGGGAAGAAACGTCCAACTATGAAGGAAGTCACATTGGAATTAGAAGGTATTCGAAAATTGGAAGGAAAATCGAATACACAAGAAAAGCATGATGAACTTGAGCTTGTTCAAATTGAAGACTATCAATCTTGGGCTAAGTATTCTACCATCTCAAACATAAGGTTAACTCCAGATCTAAATAGCATAACATCAAACTTGGAGGATATTCATATTCTTACCATTTAA 1650 0.3794 MKNAVASTAARLPCHQYTTKIEDLNENQTGHQCSFAMLVEDYRYTLYNSDHFYLRVADNLNNVPAVLEWEIVNNLTHKLPADKYANCYATNVTSSQYKHSGQRCTCVYGFDGNPYIAGGCRATSGLDHQRTYLDSYYQKTSPAKSVIIIGLFASLGSIILLLILWWLYKVVSESIVKKRKEKFFKRNGGLLLEQRFSSGEVNVDKVKLFSLNDLEKATDHFNMNRVLGNGGQGTVYKGMLIDGKIVAVKKFKVEGKVEEFINEFVILSQINHRNVVKLLGSCLETEIPLLVYEFIPNGNLFEYLHKQNEDLPITWDMRLRIAIEVAGALFYLHSAAAQPIYHRDIKSTNILLDEKYNAKVADFGTSRMVSIEATHLTTVVQGTFGYLDPEYFHTSQFTEKSDVYSFGVVLVELLTGQKPISSLRPEEARSLASYFILCMEENRLFDIIDERVIEEGKREHIIAVAILASRCLELHGKKRPTMKEVTLELEGIRKLEGKSNTQEKHDELELVQIEDYQSWAKYSTISNIRLTPDLNSITSNLEDIHILTI 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12890g00001 549 Gene3D Phosphorylase Kinase; domain 1 193 294 - -
Mupr12890g00001 549 CDD STKc_IRAK 227 492 - -
Mupr12890g00001 549 SMART serkin_6 221 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12890g00001 549 FunFam Wall-associated receptor kinase 2 295 512 - -
Mupr12890g00001 549 ProSitePatterns Serine/Threonine protein kinases active-site signature. 340 352 IPR008271 GO:0004672|GO:0006468
Mupr12890g00001 549 ProSiteProfiles Protein kinase domain profile. 221 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12890g00001 549 SUPERFAMILY Protein kinase-like (PK-like) 202 489 IPR011009 -
Mupr12890g00001 549 Pfam Protein kinase domain 222 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12890g00001 549 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 29 499 IPR045274 GO:0007166
Mupr12890g00001 549 FunFam Wall-associated receptor kinase 2 191 294 - -
Mupr12890g00001 549 Gene3D Transferase(Phosphotransferase) domain 1 295 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12890g00001 Mupr-Chr12890 2636 13184 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12890g00001 103 509 Receptor kinase-like Gene Family AT1G69730 57.857 1.21e-164 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mupr12890g00001 Pkinase 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12890g00001 - - gmx:100775935 702.59