Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12888g00004 ATGGGATGGAAAGAAAGAAAGGCTTTCGAGTTGGGTAACATGAGCACGTGCTTCGCCTTTCAGGAGTGGGGAAAAAATGTTATGGGCCAGGCCCAGACGGAAATGGCTCCCAAACCACCTAGTACGGGTTTGTTTGTCGGATTGAACAAAGGTCATGTTGTCACCAAGAAGGAGTTGCTGCCACGCCCCTCAGATCGTAAGGGGAAAACCAGCAAAAGGGTGCACTTTGTGAGGAACCTCATTCGAGAGGTTGCTGGTTTTGCACCCTATGAAAAGCGTATTACTGAGTTGCTCAAGGTTGGAAAAGATAAGAGGGCACTCAAGGTTGCAAAGAGAAAGCTTGGAACCCACAAACGTGCAAAGAAGAAGAGAGAGGAGATGTCAAATGTTCTCAGGAAGATGAGAGACAAAATGAGTGCTGTTGATCTGTGA 432 0.4722 MGWKERKAFELGNMSTCFAFQEWGKNVMGQAQTEMAPKPPSTGLFVGLNKGHVVTKKELLPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRDKMSAVDL 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12888g00004 143 MobiDBLite consensus disorder prediction 121 143 - -
Mupr12888g00004 143 Coils Coil 117 137 - -
Mupr12888g00004 143 PANTHER 60S RIBOSOMAL PROTEIN L36 30 137 IPR000509 GO:0003735|GO:0005840|GO:0006412
Mupr12888g00004 143 ProSitePatterns Ribosomal protein L36e signature. 89 99 IPR000509 GO:0003735|GO:0005840|GO:0006412
Mupr12888g00004 143 FunFam 60S ribosomal protein L36 35 140 - -
Mupr12888g00004 143 Pfam Ribosomal protein L36e 42 135 IPR000509 GO:0003735|GO:0005840|GO:0006412
Mupr12888g00004 143 MobiDBLite consensus disorder prediction 116 143 - -
Mupr12888g00004 143 Gene3D 60S ribosomal protein L36 33 140 IPR038097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12888g00004 Mupr-Chr12888 19155 22157 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12888g00004 42 136 Cytoplasmic Ribosomal Protein Gene Family AT2G37600 86.316 2.99e-54 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12888g00004 K02920 - gmx:100785591 199.134