Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12887g00001 ATGTATGTTGTAGCGTTAAGCTCAAGTGTGAGCAAGCCATTTAATTTGGTTGCAGTGTCAAAGAAAGAGCAAAGAGGACCTGGAACGGTGTTCGCTGTTTCATGCGGAGGAACGAAGCAGCAGCGTGTTAGAGGAGTAGAGGACAACTTGTACAAGATACTAAGTTTGAGTCCAGACAGTGCAACGACGGAAGACATAAAGAAAGCGTATAGATCAATGGCGCTTCTGTACCATCCCGACGTGTGCCACAACAAAGAGGAGTCAACGAGGATGTTTGTTCAACTCAACGCTGCTTACAGGACGTTGTCGAATCCTAGGCTTCGAGCAGAGTATGATTGTCAATTATTGGGTTTGAGAAGCCAAAACAAGTGTGTTTTTGCCGATGAGACTTGGAAACGTAGGTGGCAAGACCAAGTGGCTGAGTTGAAGATAAGGTCTTGCACACGTGTTCGATCGTCTTGGGCCAGTAGAATCAGAGCCAAAAACATTAATTGA 495 0.4545 MYVVALSSSVSKPFNLVAVSKKEQRGPGTVFAVSCGGTKQQRVRGVEDNLYKILSLSPDSATTEDIKKAYRSMALLYHPDVCHNKEESTRMFVQLNAAYRTLSNPRLRAEYDCQLLGLRSQNKCVFADETWKRRWQDQVAELKIRSCTRVRSSWASRIRAKNIN 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12887g00001 164 Gene3D DnaJ domain 37 140 IPR036869 -
Mupr12887g00001 164 Pfam DnaJ domain 49 112 IPR001623 -
Mupr12887g00001 164 PRINTS DnaJ domain signature 87 107 IPR001623 -
Mupr12887g00001 164 PRINTS DnaJ domain signature 52 70 IPR001623 -
Mupr12887g00001 164 PRINTS DnaJ domain signature 70 85 IPR001623 -
Mupr12887g00001 164 ProSiteProfiles dnaJ domain profile. 49 115 IPR001623 -
Mupr12887g00001 164 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 39 161 - -
Mupr12887g00001 164 CDD DnaJ 49 104 IPR001623 -
Mupr12887g00001 164 SMART dnaj_3 48 107 IPR001623 -
Mupr12887g00001 164 SUPERFAMILY Chaperone J-domain 48 116 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12887g00001 Mupr-Chr12887 3463 3957 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12887g00001 51 128 C2H2 Transcription Factor Family AT1G74250 38.554 3.46e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12887g00001 - - gmx:100783590 197.593