Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12882g00003 ATGTTTGCAGAGACAGGACTTCTCTTCCCATATTTTCGAAATTTCTCTCAAGAGTTTCAGCAGCTTGAGGAGTACTGCATGACCCAGAAGTCCAATGCTTCAATGAATGACCTTGTTCAATCTTCTTCTGCAATCTCAGAATATGATTTGTTAATAGAAGGAGATCTGTTCAAAGCACCTGAACCTATTCTTGAAGAACCAGCCATGGACCTCGATCCCGTGCAAGCAGCCATCTCAATGATATCTTGTGGGGAGGATGTCTCCTCACAGGGTCTAAAATCATCAGATATTGATGTACTTCAAAATGAACAGCTTCTGAGTGAGGTATTCTATGAATGCAAAAAGGATCTCTTAGAAAAGACAGTGATAGAGTCACCAGTCTCTGATATTATGGAAATCAAGGTTCCAGCTCTGAACATTGAGGAGAATTCAATTCAAAAAAACAAACCACTTCCTGACATGACTCTACCAAAGAGCATCAGTTCAGGAAGTTTGAATTCAATGGACTGGATGCATGGAGCTGCAATGAAGCCTGCTTTCATTGATTTCCCTGGACTAGATTTCAATGCAGTTTATGGCATGCGGAGAGCATTTAGTGAAGGAGATATAAAGACTCTCAGTAATGGCAACATGAATGTTGGCCAATCTCCCCGGGAGAGGCCTTTTTTTCTCAGCAATTGCACTAGTGAGGAACGTCGAGAAAAGCTCTCCAGATATAGGAATAAGAAGACAAAGAGAAATTTTGGCAGGAAAATTAAGTATGCTTGCAGGAAAGCACTCGCTGACAGTCAACCAAGAATTCGCGGAAGATTTGCAAAGACGGAAGAGTTAGATGTCAAGAGGCAATGA 849 0.4146 MFAETGLLFPYFRNFSQEFQQLEEYCMTQKSNASMNDLVQSSSAISEYDLLIEGDLFKAPEPILEEPAMDLDPVQAAISMISCGEDVSSQGLKSSDIDVLQNEQLLSEVFYECKKDLLEKTVIESPVSDIMEIKVPALNIEENSIQKNKPLPDMTLPKSISSGSLNSMDWMHGAAMKPAFIDFPGLDFNAVYGMRRAFSEGDIKTLSNGNMNVGQSPRERPFFLSNCTSEERREKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEELDVKRQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12882g00003 282 ProSiteProfiles CCT domain profile. 232 274 IPR010402 GO:0005515
Mupr12882g00003 282 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 159 275 IPR045281 GO:0009909
Mupr12882g00003 282 Pfam CCT motif 232 274 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12882g00003 Mupr-Chr12882 7438 11115 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12882g00003 228 278 C2C2-CO-like Transcription Factor Family AT5G57660 49.020 2.84e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr12882g00003 CCT 7.5e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12882g00003 - - aprc:113853022 484.182