Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1287g00003 ATGTTTTCAGAAAGGCCTAGTGTCTGGATGATCGTTGCATGTGTATTATCAGGGATTATTGGGCTTTTAGTCGTCGTCCTTGCTGTACTTCTATGCTGGAAAAGAATAGCATCATGGAGAAAAGTAAGCGACATTTGTGGTGCGTCACCTGGTTTTGCCAACGTAGCTGGCTGCAGTTATAGGTACGATTTGCTCGAGAAGGCCACAAATTCTTTTGATAGCGCAAACAAATTAGGCCATGATGGAGCTGGTTCCGTGTTCAAAGGAACCCTCTTCTCAGGGAGGACTGTTGCTGTTAAACGACTGTTTTTTAGTACACGGCAATGGACAGAGGGGTTATTCAATGAGGTCAATTTGATTAATGGGATTCAACACAAGAATGTGGCGAAACTTTTGGGGTGCAGCGTTGATGGTCCTGAAAGCCTGTTAGTTTATGAATTTGTGCCCAATGGAAGTCTTGATCAAGTCCTTTTCGGTAAGGACTCACAAAATGCTCTGAACTGGGAACAACGGTTTCAAATCATATGTGGGATAGCTGAGGGCTTAGAATACCTTCATGGAGGCTCTGGAACAAAGATTATTCACAGAGACATAAAGTCCAGCAACATTCTATTTGATGAGAAACTTAATCCAAAAATAGCTGATTTTGGTCTTGTCCGTTTTGTCGCTGAAAATAAATCTCATCTTAGCACAGGAAATCCAGGGACACTGGGATACATGGCTCCTGAGTATGTTATTAGAGGACAGTTGACAGAAAAGGCAGATATCTATGCATTTGGTGTGTTAGTTGTTGAAATTGTCAGTGGTAAGAAGAACAGTGATTTCATACCGGGGTCAACTTCAGTACTCCACAGTGTCTGGAAGAATTACAAAGCAAATAATATCACAGCATCCGTTGATCCCGCTCTGAATGGAAAAGTTTCGGTAGAAGAGGCATCAAAGGTGCTCCAAGTTGGTCTTCTTTGTACACAATCTTCAGATACTCTCAGACCAACCATGTCTGAAATAGTTCAGATGCTAACCAAGAAAGACTACGCTATTCCCTCCCCAAAGCAACAACCATTCCTCAATTTCAGTGGGCTAAGTCTAAATGACCGCGCCATAAGTTCCACATTGACCACTCTATCCTCAATTGGGAGTGCAAGTGCAAGGTCCTCCTTCCACAGCACCACCAGTTACCTAATTCCAAATGATGATTTTGCAGTACTGGAGAATTCCTTTTCTTCTTCTGGCAGGTTCACCACTAAGGCGAGCCCTGATTCAAATATCCAAATAAATTTTGGGACACCTGAGCCTAGGTAG 1302 0.4278 MFSERPSVWMIVACVLSGIIGLLVVVLAVLLCWKRIASWRKVSDICGASPGFANVAGCSYRYDLLEKATNSFDSANKLGHDGAGSVFKGTLFSGRTVAVKRLFFSTRQWTEGLFNEVNLINGIQHKNVAKLLGCSVDGPESLLVYEFVPNGSLDQVLFGKDSQNALNWEQRFQIICGIAEGLEYLHGGSGTKIIHRDIKSSNILFDEKLNPKIADFGLVRFVAENKSHLSTGNPGTLGYMAPEYVIRGQLTEKADIYAFGVLVVEIVSGKKNSDFIPGSTSVLHSVWKNYKANNITASVDPALNGKVSVEEASKVLQVGLLCTQSSDTLRPTMSEIVQMLTKKDYAIPSPKQQPFLNFSGLSLNDRAISSTLTTLSSIGSASARSSFHSTTSYLIPNDDFAVLENSFSSSGRFTTKASPDSNIQINFGTPEPR 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1287g00003 433 CDD STKc_IRAK 78 342 - -
Mupr1287g00003 433 MobiDBLite consensus disorder prediction 412 433 - -
Mupr1287g00003 433 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 19 366 - -
Mupr1287g00003 433 SMART serkin_6 72 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1287g00003 433 Gene3D Transferase(Phosphotransferase) domain 1 148 352 - -
Mupr1287g00003 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Mupr1287g00003 433 Gene3D Phosphorylase Kinase; domain 1 49 147 - -
Mupr1287g00003 433 Pfam Protein tyrosine and serine/threonine kinase 75 340 IPR001245 GO:0004672|GO:0006468
Mupr1287g00003 433 FunFam Cysteine-rich receptor-like protein kinase 2 148 348 - -
Mupr1287g00003 433 ProSiteProfiles Protein kinase domain profile. 72 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1287g00003 433 SUPERFAMILY Protein kinase-like (PK-like) 59 356 IPR011009 -
Mupr1287g00003 433 FunFam Putative DUF26-domain receptor-like protein kinase family protein 52 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1287g00003 Mupr-Chr1287 32880 34883 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1287g00003 59 365 Receptor kinase-like Gene Family AT1G70520 50.314 4.84e-106 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr1287g00003 PK_Tyr_Ser-Thr 1.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1287g00003 - - gmx:100780384 609.372