Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12874g00002 ATGCCGAGTCGATCAACGGGAGCCATAACCCAGGACTGGGACCCGGTGGTGCTGCACAAGTCCAAGCCCAAGGCGCACGACCTCCGCAACCCCAAGGTGGTCAACCAGGCTCTCCGCTCCGGCGCGGAGGTGCTCACGGTCAAAAAGTTCGACGCCGCTTCCAACAGGAAGCCCGGCGGTCCGGCGTTGAACGCGAGGAAGCTGGACGAAGGGACGGAGCCGGCGCCGATGGAGCGCGTGGCGGGGGAGGTGCGACACGCGATTCAAAAGGCGCGTGTGGAGAAGAAGATGAGCCAGGCTGAGCTGGCGAAACAGATAAACGAGCGGACGCAGGTGGTGCAGGAATACGAGAATGGTAAAGCCGTACCGAACCAGGCCGTGCTAGCAAAGATGGAGAGAGTGCTTGGAGTCAAGCTCAGAGGCAAGATAGGAAAGTGA 438 0.6142 MPSRSTGAITQDWDPVVLHKSKPKAHDLRNPKVVNQALRSGAEVLTVKKFDAASNRKPGGPALNARKLDEGTEPAPMERVAGEVRHAIQKARVEKKMSQAELAKQINERTQVVQEYENGKAVPNQAVLAKMERVLGVKLRGKIGK 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12874g00002 145 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 11 142 - -
Mupr12874g00002 145 ProSiteProfiles Cro/C1-type HTH domain profile. 88 142 IPR001387 -
Mupr12874g00002 145 SMART mbf_short4 87 142 IPR001387 -
Mupr12874g00002 145 Pfam Helix-turn-helix 88 139 IPR001387 -
Mupr12874g00002 145 Coils Coil 88 108 - -
Mupr12874g00002 145 Gene3D - 71 145 IPR010982 GO:0003677
Mupr12874g00002 145 MobiDBLite consensus disorder prediction 52 73 - -
Mupr12874g00002 145 Pfam Multiprotein bridging factor 1 11 80 IPR013729 -
Mupr12874g00002 145 FunFam Multiprotein bridging factor 1 72 145 - -
Mupr12874g00002 145 CDD HTH_XRE 87 139 IPR001387 -
Mupr12874g00002 145 SUPERFAMILY lambda repressor-like DNA-binding domains 85 139 IPR010982 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12874g00002 Mupr-Chr12874 15577 16014 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Mupr12874g00002 MBF1 3.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12874g00002 K03627 - zju:107431864 229.18