Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12868g00002 GGTCATTTCAATGTAGAATTTGTGGATCAAAATGGATTTAACAGATCACAGGGTGGTCCTCCAGTAGGAAGTGGAGTGCCTTTGAGTTCTGGAGTGAATTCAGTTACACATATTGATCAGTTTTCTTGTGGGAATGACTATGCTCTGAAGGTAAGGAAACCATATACTATCACCAAACAAAGAGAGAGATGGACAGATGAAGAGCATAAGAAGTTCCTTGAAGCTTTAAAGCTGTATGGCCGGGCTTGGCGGCGTATTGAAGAACATGTTGGCACAAAGACTGCTGTTCAGATTCGAAGTCATGCTCAGAAGTTTTTTTCTAAGGTTCTTCGCGAACCTACTGGGAACATTACACACAGAGTAGAGTCGATTGAAATTCCTCCTCCAAGACCAAAACGAAAGCCCATGCATCCTTACCCTCGCAAACTAGTCGAGACACCTAACAAGGAAATTTCGATCCCAGAACAACTTATGAAGTCTAGTTCTCTGAAGTCATCAGATTTTGATCTAGAAAACCAATCTCCAAAATCAGTATTATCTGCAGTTGGTTCAGACAGCCTTGGCTCCTCGGATTCAGACACACCGAATGGAAGTTTGTCCCCGATGTCATCCATTAGTGGTGTCCATACAAGTGGTTTCACACATGCTGAATACAAAACAACATCCGAGGAAGCTGTTCTCAATGCTGATTCAGCTCATGATGAGAAACCTCTCGTGAAATTCAAGCTTCCTCCAAATGAAAGTGTTTCCATCAAAGAAGACATGGCAGAAGAATCTTCTGGTCGGACTTTCAAACTTTTTGGAATGACTCTATTTGTAACAGACACCTGCAAACCATCTTCAACAATTGAGGCATGCAAACCAATACCTCTAAACATAGGTGCGCAATGCCTTAGCAATGGAGATGGAAAATTGAAACTTCTTTGCCACAGTACACCAAGTGAAACATCAGCCATGTCCCAGCTAAAGGTGAGAGTGGGACCTGAAACATGTGGGAAAGGGTTTGTGCCATATAAAAGGTGCATGGCAGGGAGAGAACCAGTCTTCATCTGTGACAGC 1059 0.4287 GHFNVEFVDQNGFNRSQGGPPVGSGVPLSSGVNSVTHIDQFSCGNDYALKVRKPYTITKQRERWTDEEHKKFLEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFFSKVLREPTGNITHRVESIEIPPPRPKRKPMHPYPRKLVETPNKEISIPEQLMKSSSLKSSDFDLENQSPKSVLSAVGSDSLGSSDSDTPNGSLSPMSSISGVHTSGFTHAEYKTTSEEAVLNADSAHDEKPLVKFKLPPNESVSIKEDMAEESSGRTFKLFGMTLFVTDTCKPSSTIEACKPIPLNIGAQCLSNGDGKLKLLCHSTPSETSAMSQLKVRVGPETCGKGFVPYKRCMAGREPVFICDS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12868g00002 353 Pfam Myb-like DNA-binding domain 61 104 IPR001005 -
Mupr12868g00002 353 ProSiteProfiles SANT domain profile. 59 110 IPR017884 -
Mupr12868g00002 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Mupr12868g00002 353 MobiDBLite consensus disorder prediction 125 144 - -
Mupr12868g00002 353 FunFam protein REVEILLE 6 isoform X1 63 111 - -
Mupr12868g00002 353 MobiDBLite consensus disorder prediction 153 206 - -
Mupr12868g00002 353 CDD SANT 63 106 IPR001005 -
Mupr12868g00002 353 MobiDBLite consensus disorder prediction 119 206 - -
Mupr12868g00002 353 SUPERFAMILY Homeodomain-like 55 108 IPR009057 -
Mupr12868g00002 353 PANTHER SWI/SNF COMPLEX-RELATED 44 270 - -
Mupr12868g00002 353 SMART sant 60 108 IPR001005 -
Mupr12868g00002 353 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Mupr12868g00002 353 Gene3D - 63 109 - -
Mupr12868g00002 353 NCBIfam myb-like DNA-binding domain, SHAQKYF class 59 108 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12868g00002 Mupr-Chr12868 18028 19815 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr12868g00002 Myb_DNA-binding 7.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12868g00002 - - gmx:780539 528.094