Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12862g00003 ATGAATTCCCTGTTTCTCCACAATGTAAACACTTCCATTATACACTTCCCATTGCCACTGTCACCACCAAAACTCCTCCGTCGACGACACGAGCGTTACCCGCGCTTCCAATGCTGCGTGGACATCGACATGGTGAAGAACAGGCAAGGCATCTATACCCCCAAAAACGACAAGGTGGTCGTCCTCTGGGATCTCGACAACAAGCCACCCCGCGGGCCTCCCTACGACGCCGCCGTTTCGCTCAAAACCCTGGCGGCACGCTTCGGCGACCTCGTAGACTTCTCGGCCTACGCGAACCGGCACGCCTTCATCCACCTGCCCCAGTGGGTCCTCACCCAGCGCCGCGACCGCAGAGACCTCGACATCCTGGAGCGCAAGAACCTCGTGACGCCCCCAGAGCCCTACACGTGCGGCGTGTGCGGGCGTAAGTGCAAGACCCACCTCGACCTCAAGAAGCACTTCAAGCAACTCCACCTGCGCGAGCGCCAGAAGAAGCTCAACCGCTTGAAGTCCCTCAAGGGGAAGAAGCGCCACCGTTTCAAGGAGCGGTTTTTGCGCGGGAATCATAAGTACAATGAGGCCGCGAGGACGCTTCTGGTGCCCAAGGTCGGCTACGGGCTGGCGGCGGAGCTGCGGCGGGCGGGGGTGTTCGTGAAGACGGTGCAGGACAAGCCCCAGGCGGCGGACTGGGCGCTGAAGAGGCAGATGGTGCATTCCATGAGCAGAGGGATTGATTGGCTGTTTTTGGTTTCCGATGATTCTGATTTTTCGGAGATGTTGAGGAGGGCCAGAGAGGCTGATTTGGGTACCGTTGTGGTTGGGGATTGGGATAGAGCGTTGGGGAGGCACGCCGATTTCTGGGTTCCATGGACTGGGGTTGAGAATGGGGATGTTGATTTGCTCCCCAAGAGAAGGGACAAGAGGACAATGGACGAGGTTTTGGAAGATCATCACGATGCCTTGTCTTTAAATGAGGATGAGAATGAGGATTTGAGGCAGGATTTTCTCTTGTTGTATAGTGAGGATGATGATGATGACCACCATGTGGAAGACTACTATGATGATGATGATGATGATGAAGAAGAAGAAGAAGATGGGCCGTCCGAGGTGTGTTAA 1116 0.56 MNSLFLHNVNTSIIHFPLPLSPPKLLRRRHERYPRFQCCVDIDMVKNRQGIYTPKNDKVVVLWDLDNKPPRGPPYDAAVSLKTLAARFGDLVDFSAYANRHAFIHLPQWVLTQRRDRRDLDILERKNLVTPPEPYTCGVCGRKCKTHLDLKKHFKQLHLRERQKKLNRLKSLKGKKRHRFKERFLRGNHKYNEAARTLLVPKVGYGLAAELRRAGVFVKTVQDKPQAADWALKRQMVHSMSRGIDWLFLVSDDSDFSEMLRRAREADLGTVVVGDWDRALGRHADFWVPWTGVENGDVDLLPKRRDKRTMDEVLEDHHDALSLNEDENEDLRQDFLLLYSEDDDDDHHVEDYYDDDDDDEEEEEDGPSEVC 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12862g00003 371 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 27 362 - -
Mupr12862g00003 371 Coils Coil 314 334 - -
Mupr12862g00003 371 MobiDBLite consensus disorder prediction 344 371 - -
Mupr12862g00003 371 CDD PIN_LabA-like 145 275 - -
Mupr12862g00003 371 ProSiteProfiles Zinc finger C2H2 type domain profile. 135 163 IPR013087 -
Mupr12862g00003 371 MobiDBLite consensus disorder prediction 339 371 - -
Mupr12862g00003 371 ProSitePatterns Zinc finger C2H2 type domain signature. 137 158 IPR013087 -
Mupr12862g00003 371 Gene3D - 52 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12862g00003 Mupr-Chr12862 37435 40700 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12862g00003 35 329 C2H2 Transcription Factor Family AT5G52010 68.197 1.51e-152 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr12862g00003 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12862g00003 - - vvo:131596395 478.018