Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12861g00001 ATGAAACAGATACTTGCATTTTTAACTGAGTTATGTGAGCATGATGCAGTTTGGGATACCTATGACATCATCCTCGGGAGCAGTGACAATCCCAGGCTGATATCGGCAAGCCAAGACTACACACATTGTGTGCTCAAATATAAAAGGCCAAGATTTTTGTACAAGTGTGACACAATGGAGGACTTAAAGGAAAGGGTGAAGGAAGGGGAACCAAAGCAAAAAAAGTACAGAGGAGTAAGGAGGAGGCCATGGGGAAAGTTTGCTGCAGAGATTCGAGATTCAGCAAGAGGTGGAGCACGTGTGTGGCTTGGGACCTTTAACACTGCTGAGGAGGCTGCAAGAGCTTATGATCGTGCTGCCTTTGAGATGAGAGGCACTGTGGCCATTCTCAACTTCCCAGATGAACACCTTCCTTGCAATGTGCCTTCTCTTACCAAGTCCTCATCATCTAAAACTCAGCTTGGTAAACAAGTTCTAGAATTTGAGTGTTTGGATGACAAATTGTTGGAGGAACTCCTCAATTGTGATGAGAAAAGCATTCATCAAAACTAA 552 0.4402 MKQILAFLTELCEHDAVWDTYDIILGSSDNPRLISASQDYTHCVLKYKRPRFLYKCDTMEDLKERVKEGEPKQKKYRGVRRRPWGKFAAEIRDSARGGARVWLGTFNTAEEAARAYDRAAFEMRGTVAILNFPDEHLPCNVPSLTKSSSSKTQLGKQVLEFECLDDKLLEELLNCDEKSIHQN 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12861g00001 183 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Mupr12861g00001 183 PRINTS Ethylene responsive element binding protein signature 99 115 IPR001471 GO:0003700|GO:0006355
Mupr12861g00001 183 SUPERFAMILY DNA-binding domain 75 135 IPR016177 GO:0003677
Mupr12861g00001 183 FunFam Ethylene-responsive transcription factor 2 74 135 - -
Mupr12861g00001 183 Pfam AP2 domain 75 125 IPR001471 GO:0003700|GO:0006355
Mupr12861g00001 183 SMART rav1_2 75 139 IPR001471 GO:0003700|GO:0006355
Mupr12861g00001 183 Gene3D AP2/ERF domain 74 134 IPR036955 GO:0003700|GO:0006355
Mupr12861g00001 183 CDD AP2 74 134 IPR001471 GO:0003700|GO:0006355
Mupr12861g00001 183 ProSiteProfiles AP2/ERF domain profile. 75 133 IPR001471 GO:0003700|GO:0006355
Mupr12861g00001 183 PANTHER DNA-BINDING DOMAIN 66 149 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12861g00001 Mupr-Chr12861 4937 7065 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12861g00001 72 178 AP2-EREBP Transcription Factor Family AT3G23230 56.557 6.65e-41 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr12861g00001 AP2 5.3e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12861g00001 - - gmx:100800069 171.4