Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12853g00001 ATGGAACATAAGAGGAAGCTTAAGGAGGAGTATGGAATTGAGCCCTGGACTTTTATTCAGAAGGTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCTCACCAAGTCAGAAATCTGAAGTCATGCATTAAGGTTGCATTGGATTTTGTCTCTCCTGAAAATGTTGGGGAATGCTTCCGTTTGACAGAGGAATTTCGCACGCTTCCAATAAATCATGGGTCTACCGAGGACAAATTGGAGGTGAAGAAGATGACAATATATGCTATGCAAGATGTGATCGGAAAATTGGAGGAAGCAAGGATATCATATCACTATATGTAA 321 0.4112 MEHKRKLKEEYGIEPWTFIQKVGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVGECFRLTEEFRTLPINHGSTEDKLEVKKMTIYAMQDVIGKLEEARISYHYM 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12853g00001 106 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 1 99 IPR045109 GO:0032454|GO:0033169
Mupr12853g00001 106 Gene3D Cupin 1 75 - -
Mupr12853g00001 106 ProSiteProfiles JmjC domain profile. 1 66 IPR003347 -
Mupr12853g00001 106 SUPERFAMILY Clavaminate synthase-like 3 86 - -
Mupr12853g00001 106 Pfam JmjC domain, hydroxylase 4 49 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12853g00001 Mupr-Chr12853 345 8128 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mupr12853g00001 JmjC 2.2e-12 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12853g00001 K15601 - gmx:100805723 200.675