Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12852g00001 ATGGAGTGCAACAAAGATGAGGCAGTTAGGGCCAAAGAAATAGCAGAGAGGAAATTTTCAGAAAGGGAATATGTTGGTGCAAAGAAGTTTGCTCTCAAGGCCCAAAATCTGTATCCTGATTTGGAAGATATTTCCCAGCTTTTGACAACAATTGATATTTATATATCTGCTGAGAATAAAGTAAGCGGAGAAATGGATTGGTATGGTATACTTGGAGTGAGCCCCTTTGCTGATGAGGAGACTGTCAGAAAGCAATACAGGAAGCTGGCTCTCACCCTTCACCCTGACAAAAACAAGTCTTTAGGTGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCATGGAGTTTGTTATCAGATAAGACCAAGAGACTAGAATATAACCAGAAGAGGAGTTTGAAAGGATTCCAACATAATACTCCTAACCATGTTGGATCTCAATCAGATGCACCTGGTCCAAATGGTTTTTATAATGTAAAGAAGAATGTAACTTCAAATGTGGGGACGGGAAATAATAATGGTCGGGCACCATCAACTGCGGTTCCTCCTCCACATAAAAAGGCTGAAACCTTTTGGACTATCTGTAATCGGTGCAGGACACATTATGAATATCTCAGGATTTATTTGAATCACACTCTTTTATGTCCAAACTGTAATGAAGCTTTTGTTGCTGCAGAGAGGGGTCCACCACCAAATGTTTTTAAGCCATCAAATTGGTCTTCTCATCAACGGCATCAGAATTCTCAACACCATGCTGGAAGTAATAATACAAACTTTCAGTGGGGTTCTCACTCTAGAATGGCTGGTTTTGGTAGCACAGATGGATCAACATCTGTTGCAGCTCAAGCTGCAAGTGTTGTGCAGCAGGCAAGTGAGAAAGTAAGGAGAGATGGTTCTTTTCACAAAGCTGAAAAACCTATGAAAAAAAGGAAGACAGATGATATTCGCATTAATGGTTATCAAGGATACATGGCAAATCATATGGCTATGGGACATGGAGCGGCTGGTTTGGGCAGCTTTTCAGAATCGGGAAAGACTAACTTGGAAACAGAAAGGAATTGTGGTTTTTCAGGTATTCCTGGCAAGCATTACAGCACAAGAGAATTGTCAATGTTTGAAATACGAAACATGTTGATGGATAAGTCACGCATTGAACTTCGTAAGAAACTTAAAGAATGGAAATCAATGGCTGAAGCTAGGATTAACAAGGACAAAGAGAATAGGAGACAGAAAAGACCATTTAATGACAAAACACCTGGTTCAGAGAAGCTGAGAGAGCCCACTGTTAATGGTAACAGGCATCCGGGTGTTGATTCTTTTGCTGTCAGATCTGATGATACAGTTAAGAAGAACCAAACTTATGTTACAATCAATGTTCCAGACCCTGATTTTCACAATTTTGACTTGGATAGAGATGAAAAGTCCTTTGCAGAGGACCAGGTCTGGGCTGCTTATGATGATGATGATGGAATGCCTCGATATTATGCTAGAATTCACAAGGTTGTCTCCATAAAGCCATTTAAAATGCGGATCAGTTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCAATAGATTGGGTAGGTTCTGGATTTTATAAAACCTGTGGGGATTTCAGAACTGGCAAGCATGAAATAACTGAATCATTAAATTCATTCTCTCACAAGGTTAGGTGGACAAAAGGCACTAGAGGTGTTGTCCGGATCTTTCCTGGAAAGGGAGAAGTCTGGGCTCTTTATAGAAACTGGTCTCCTGATTGGAATGAACATACCCCAGATGATGTGATACACAAGTATGATATGGTGGAGGTGCTTGAAGATTTCAATGAAGAACAAGGCATTTTAGTTACCCCCCTTGTTAAGGTTGCTGGTTTTAGGACCGTGTTTCAGAGGCACATGGACCATGATCAGGAGAGGAGGATTCTTAAAGAGGAACTGTTTCGATTCTCTCATCAGGTTCCTAATTACTTGCTTACTGGAGAAGAAGCTCAGAATGCTCCAAAGGGTTGTCGAGAGTTGGATCCAGCCGCCACTCCTTTAGACCTCCTTCAGATAATAACAGAAGCTAATGAGAGATCGGATAATGCTAAACGAGGGTAG 2097 0.413 MECNKDEAVRAKEIAERKFSEREYVGAKKFALKAQNLYPDLEDISQLLTTIDIYISAENKVSGEMDWYGILGVSPFADEETVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNQKRSLKGFQHNTPNHVGSQSDAPGPNGFYNVKKNVTSNVGTGNNNGRAPSTAVPPPHKKAETFWTICNRCRTHYEYLRIYLNHTLLCPNCNEAFVAAERGPPPNVFKPSNWSSHQRHQNSQHHAGSNNTNFQWGSHSRMAGFGSTDGSTSVAAQAASVVQQASEKVRRDGSFHKAEKPMKKRKTDDIRINGYQGYMANHMAMGHGAAGLGSFSESGKTNLETERNCGFSGIPGKHYSTRELSMFEIRNMLMDKSRIELRKKLKEWKSMAEARINKDKENRRQKRPFNDKTPGSEKLREPTVNGNRHPGVDSFAVRSDDTVKKNQTYVTINVPDPDFHNFDLDRDEKSFAEDQVWAAYDDDDGMPRYYARIHKVVSIKPFKMRISWLNSRSNSELGPIDWVGSGFYKTCGDFRTGKHEITESLNSFSHKVRWTKGTRGVVRIFPGKGEVWALYRNWSPDWNEHTPDDVIHKYDMVEVLEDFNEEQGILVTPLVKVAGFRTVFQRHMDHDQERRILKEELFRFSHQVPNYLLTGEEAQNAPKGCRELDPAATPLDLLQIITEANERSDNAKRG 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12852g00001 698 Coils Coil 685 698 - -
Mupr12852g00001 698 MobiDBLite consensus disorder prediction 236 310 - -
Mupr12852g00001 698 MobiDBLite consensus disorder prediction 400 439 - -
Mupr12852g00001 698 SUPERFAMILY Chaperone J-domain 57 126 IPR036869 -
Mupr12852g00001 698 MobiDBLite consensus disorder prediction 132 157 - -
Mupr12852g00001 698 MobiDBLite consensus disorder prediction 236 288 - -
Mupr12852g00001 698 PRINTS DnaJ domain signature 86 101 IPR001623 -
Mupr12852g00001 698 PRINTS DnaJ domain signature 102 122 IPR001623 -
Mupr12852g00001 698 PRINTS DnaJ domain signature 68 86 IPR001623 -
Mupr12852g00001 698 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Mupr12852g00001 698 Pfam DnaJ domain 66 127 IPR001623 -
Mupr12852g00001 698 MobiDBLite consensus disorder prediction 293 310 - -
Mupr12852g00001 698 MobiDBLite consensus disorder prediction 400 428 - -
Mupr12852g00001 698 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Mupr12852g00001 698 Pfam Domain of unknown function (DUF3444) 455 661 IPR024593 -
Mupr12852g00001 698 Gene3D DnaJ domain 63 174 IPR036869 -
Mupr12852g00001 698 CDD DnaJ 66 119 IPR001623 -
Mupr12852g00001 698 PANTHER BNAC03G44070D PROTEIN 1 678 - -
Mupr12852g00001 698 SMART dnaj_3 65 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12852g00001 Mupr-Chr12852 1294 3390 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12852g00001 4 224 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.599 1.27e-30 122