Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12840g00001 ATGGCAACAAAGCAAGTGACAAGTTCCCAACATAAACAAAAACACATAAAAGTTAGCATTCTCATGGCTTCCAATAATGGATACAAAGCAAGTGAGCTCCTTGAAGCTCAAGCTCACTTGTACAGAATTCTATATAGCTTTCTGAATCCCATGTGTATCAAATGGGCCATTGACCTTGGCATACCTGACATAATCCACAAGCATGGCCACCCCATTACTCTTCCTGAGCTAGTTTCAGCTCTTAAGGTTCCAAAAGCAAAAGCCACTTGTGTCCAACGCCTCATGCATTTGTTGGTACACAATGACTTCTTTGAAATCATCAACACTGATGATGATAGCAATAGCAATGAAGCCTATGCTCTTACTCCACCTTCGCAAGTCCTTGTCAATGACACTGACCATTGTTTATCTTCCATGGTTAAGCTGTTAAGCAACCCAACTCTTGTTGGTTCATACCATCAGTTGGGGGAATGGACTTGTGGGGAGGAGCTCACAATCATTGAGACTGCATTAGGCCCTGGATGCTATTGGGACTTCATTCATCAAGATGCCACTCACTTGAAGATGTTCAATGAGGGCATGGAAAGTGACTCTCACATAATGAGGTTGGCACTGAGAGATTGCAAATCAGTTTTTGAAGGGCTGGATTCCATAGTTGATGTTGGTGGTGGAACTGGAAACACTGCTAAGATTATTTGTGAGGCATTTCCTAAGTTGCAATACACAGTCTTGGACCTTCCACAGGTTGTTGCAGGGTTAACAGGAAGCAACAATTTGAGTTTTGTTGGTGGGAACATGTTTAAGTCTGTCCCTCAAGCTGATGCAGTTTTACTCAAGTGGGTGTTACACAATTGGAGCGATGATGATTGCATAAAGATACTAAAAAATTGTAAAGAAGCTATTTCAGGCAAAGGTGAAGGGGGGAAAGTGATCATCATAGACATTGTGATAAATGAGAAACAAGATGAGCATGAAATGACTGAAGTGAAGCTTTTATTCGATATAGTTATGATGACCTATCACAATGGAAAAGAGAGAAGTGAAAAAGATTGGAAACGGCTTTTTGTGGAAGCAGGCTTCAACCGTTACAAGTTATTCCCTGCATTTGGCTTTCGGTCTTTGATTGAGCTTTATCCTTAA 1140 0.4114 MATKQVTSSQHKQKHIKVSILMASNNGYKASELLEAQAHLYRILYSFLNPMCIKWAIDLGIPDIIHKHGHPITLPELVSALKVPKAKATCVQRLMHLLVHNDFFEIINTDDDSNSNEAYALTPPSQVLVNDTDHCLSSMVKLLSNPTLVGSYHQLGEWTCGEELTIIETALGPGCYWDFIHQDATHLKMFNEGMESDSHIMRLALRDCKSVFEGLDSIVDVGGGTGNTAKIICEAFPKLQYTVLDLPQVVAGLTGSNNLSFVGGNMFKSVPQADAVLLKWVLHNWSDDDCIKILKNCKEAISGKGEGGKVIIIDIVINEKQDEHEMTEVKLLFDIVMMTYHNGKERSEKDWKRLFVEAGFNRYKLFPAFGFRSLIELYP 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12840g00001 379 Pfam Dimerisation domain 51 99 IPR012967 GO:0046983
Mupr12840g00001 379 FunFam O-methyltransferase ZRP4 130 379 - -
Mupr12840g00001 379 Pfam O-methyltransferase domain 153 361 IPR001077 GO:0008171
Mupr12840g00001 379 PIRSF O-mtase 18 379 IPR016461 GO:0008168
Mupr12840g00001 379 CDD AdoMet_MTases 218 317 - -
Mupr12840g00001 379 FunFam Coniferyl alcohol 9-O-methyltransferase 23 128 - -
Mupr12840g00001 379 PANTHER O-METHYLTRANSFERASE 32 364 IPR016461 GO:0008168
Mupr12840g00001 379 Gene3D Vaccinia Virus protein VP39 129 379 IPR029063 -
Mupr12840g00001 379 SUPERFAMILY "Winged helix" DNA-binding domain 31 132 IPR036390 -
Mupr12840g00001 379 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 377 IPR029063 -
Mupr12840g00001 379 Gene3D - 22 128 IPR036388 -
Mupr12840g00001 379 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 41 379 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12840g00001 Mupr-Chr12840 7535 8881 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12840g00001 35 377 Monolignol Biosynthesis Gene Families AT5G54160 31.322 5.04e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12840g00001 K22588 - gmx:100818724 438.343