Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1283g00003 ATGAAGAGAGGGACGCAATTTGAGGTCGACGCTGGAAACGAGCAACCTGGGGCAGCGCAGGACGCATACGTGGACGTCAGGGTAGGGGATAGAGACCTCGTGGAGGAGGAAATCGAGGAGAGGGTAGAGATGGGTGTAGGGGTCGCACGTGAGGAGCGCAGGGAGCATGTCCAGGATGCGGCCCATGGCGGCGCGCGGGATGCCCAGGGAGGAGAGGCACCGTGTCACGGATTTCACGGCCGAGAGAGGGGAGGACCGGAGAGTTTTGAGGTACACAACCTTTTCGCGGAATACGAGGCCGCGGTCCGAGGTTGCGGGAGTTTGGCGACGGGCGCTTCGGTTTTGGAAGAACTGCGGCGAGAGTTCCATGTCGTGGATGACCAAGATAACGTTGTTGTTTTTTGTGCGTTCGCGTTCTCTGTCTGTCTCTTTATCAATACTATGTTGATAAAAGGAATGGGCAGGGTAAAGCTAAAGATAAGGAGGTTGGAGAATACCAATGGTCGTCTTGCAACCTATGCTAAAAGAAAGAATGGAATCATGAAGAAAGCTTCAGAATTATCTATACTTTGTGATATAGATATTATACTTCTCATGTTCTCACCAACTGGAAAGCCTTCATTGTGCAGGGGAAAGCGCAGATTTGATTCCTTATCTAATTATTCTCTCCCATTCATTATTGGACATAGTAACTTTGAAGAGGTTATAGCAAAGTTTGCTCAACTAACTCCACAAGAAAGGGCAAAGAGGTGCATTTAA 759 0.4941 MKRGTQFEVDAGNEQPGAAQDAYVDVRVGDRDLVEEEIEERVEMGVGVAREERREHVQDAAHGGARDAQGGEAPCHGFHGRERGGPESFEVHNLFAEYEAAVRGCGSLATGASVLEELRREFHVVDDQDNVVVFCAFAFSVCLFINTMLIKGMGRVKLKIRRLENTNGRLATYAKRKNGIMKKASELSILCDIDIILLMFSPTGKPSLCRGKRRFDSLSNYSLPFIIGHSNFEEVIAKFAQLTPQERAKRCI 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1283g00003 252 PANTHER SERUM RESPONSE FACTOR HOMOLOG 155 208 - -
Mupr1283g00003 252 Gene3D - 166 251 IPR036879 GO:0003677|GO:0046983
Mupr1283g00003 252 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 162 206 IPR002100 GO:0003677|GO:0046983
Mupr1283g00003 252 SMART madsneu2 153 212 IPR002100 GO:0003677|GO:0046983
Mupr1283g00003 252 ProSiteProfiles MADS-box domain profile. 153 205 IPR002100 GO:0003677|GO:0046983
Mupr1283g00003 252 CDD MADS 154 206 - -
Mupr1283g00003 252 PRINTS MADS domain signature 190 211 IPR002100 GO:0003677|GO:0046983
Mupr1283g00003 252 PRINTS MADS domain signature 155 175 IPR002100 GO:0003677|GO:0046983
Mupr1283g00003 252 PRINTS MADS domain signature 175 190 IPR002100 GO:0003677|GO:0046983
Mupr1283g00003 252 SUPERFAMILY SRF-like 153 221 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1283g00003 Mupr-Chr1283 32088 35688 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1283g00003 153 250 Type I MADS-box Gene Family AT2G03060 65.306 3.80e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mupr1283g00003 SRF-TF 7.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1283g00003 - - lang:109356063 143.28