Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1283g00002 ATGGAAGATGCTTGCATGTGGCATTGGCAGCTTGTTAACCATCCAAGGAAAATGGCTCTCATTGGTTTGCTCTTGGTGGGGTTTCTCACAACGTTCTCCTCTGCGTATGGATATGGCGGTGGCTGGACCAATGCACATGCTACCTTCTATGGAGGGAGTGATGCATCAGGAACAATGGGTGGGGCTTGTGGATATGGAAACCTCTACAGCCAGGGGTATGGAACAAACACTGCTGCTCTGAGCACTGCTTTGTTCAACAATGGCCTTAGCTGTGGGTCATGCTATGAGATAAGGTGTGTGAATGATCACAGGTGGTGTCTTCCTGGCTCCATTTTGGTCACTGCCACCAATTTCTGTCCACCAAACAGTGCCTTACCCAACAATGCAGGGGGCTGGTGCAACCCTCCTCTGCACCATTTTGATCTCTCTCAGCCTGTTTTCCTGCGCATTGCACAATATAGAGCTGGAATTGTGCCTGTTTCTTACAGAAGGGTACCCTGCAGGAGAAGGGGAGGCATAAGGTTCACAATCAATGGTCACTCCTACTTCAACCTGGTCCTCATAACAAACGTTGGTGGTGCTGGGGATGTGCATGGTGTGGCCATCAAAGGGTCCAGAACTGGATGGATGCCAATGTCAAGGAACTGGGGTCAGAACTGGCAGAGCAACAACTACCTCAATGGCCAAAGCCTCTCCTTCAAGGTCACTACCAGTGATGGCCAAACTGTGGTGTCCTACAATGTTGCCCCATCTGGGTGGTCCTTTGGCCAAACATACACTGGTGCTCAATTCCGCTAG 798 0.505 MEDACMWHWQLVNHPRKMALIGLLLVGFLTTFSSAYGYGGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIRCVNDHRWCLPGSILVTATNFCPPNSALPNNAGGWCNPPLHHFDLSQPVFLRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHGVAIKGSRTGWMPMSRNWGQNWQSNNYLNGQSLSFKVTTSDGQTVVSYNVAPSGWSFGQTYTGAQFR 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1283g00002 265 PANTHER EXPANSIN-A15 25 264 IPR002963 GO:0009664
Mupr1283g00002 265 CDD DPBB_EXPA_N 41 167 - -
Mupr1283g00002 265 FunFam Expansin 31 168 - -
Mupr1283g00002 265 SUPERFAMILY Barwin-like endoglucanases 28 190 IPR036908 -
Mupr1283g00002 265 Pfam Lytic transglycolase 77 162 IPR009009 -
Mupr1283g00002 265 Pfam Expansin C-terminal domain 173 250 IPR007117 -
Mupr1283g00002 265 Gene3D - 172 264 IPR036749 -
Mupr1283g00002 265 Gene3D - 28 168 IPR036908 -
Mupr1283g00002 265 PRINTS Expansin/Lol pI family signature 247 261 IPR007118 GO:0005576
Mupr1283g00002 265 PRINTS Expansin/Lol pI family signature 81 99 IPR007118 GO:0005576
Mupr1283g00002 265 PRINTS Expansin/Lol pI family signature 41 56 IPR007118 GO:0005576
Mupr1283g00002 265 PRINTS Expansin/Lol pI family signature 59 77 IPR007118 GO:0005576
Mupr1283g00002 265 PRINTS Expansin/Lol pI family signature 155 171 IPR007118 GO:0005576
Mupr1283g00002 265 PRINTS Expansin/Lol pI family signature 209 223 IPR007118 GO:0005576
Mupr1283g00002 265 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 60 172 IPR007112 -
Mupr1283g00002 265 PRINTS Expansin signature 111 121 IPR002963 GO:0009664
Mupr1283g00002 265 PRINTS Expansin signature 72 86 IPR002963 GO:0009664
Mupr1283g00002 265 PRINTS Expansin signature 130 147 IPR002963 GO:0009664
Mupr1283g00002 265 PRINTS Expansin signature 171 183 IPR002963 GO:0009664
Mupr1283g00002 265 PRINTS Expansin signature 99 110 IPR002963 GO:0009664
Mupr1283g00002 265 PRINTS Expansin signature 183 204 IPR002963 GO:0009664
Mupr1283g00002 265 PRINTS Expansin signature 247 263 IPR002963 GO:0009664
Mupr1283g00002 265 PRINTS Expansin signature 147 160 IPR002963 GO:0009664
Mupr1283g00002 265 PRINTS Expansin signature 218 239 IPR002963 GO:0009664
Mupr1283g00002 265 SMART dpbb_1 77 162 IPR007112 -
Mupr1283g00002 265 FunFam Expansin 172 264 - -
Mupr1283g00002 265 SUPERFAMILY PHL pollen allergen 169 261 IPR036749 -
Mupr1283g00002 265 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 182 261 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1283g00002 Mupr-Chr1283 22215 24198 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1283g00002 17 265 Expansin Gene Family AT2G03090 81.526 7.72e-154 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1283g00002 - - gmx:100796316 504.597