Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12813g00001 ATGAGCATTGGCCAACCCCCACGCTGTCTTTATTCTCTTCCCTTTCCTCTCAGCTCGCTACTCTCAACTCTCAACCTTCATTCATACCCAATGAAGATCCAGTGCGACGTCTGCAACAAACACGAGGCCTCCGTCTTCTGCACCGCCGACGAAGCCGCCCTCTGTGCCGCCTGCGACCACCGCGTCCACCATGCCAATAAACTCGCCTCCAAACACCAACGCTTCTCTCTTCTCCGCCCTTCTCCTAAACAACACCCTCTCTGCGATATCTGTCAGGACAAAACTGCTTTCACGTTCTGTCAGCAAGACAGAGCGATTCTCTGCAAAGACTGTGACGTGTCCGTTCATTCTGCCAACGAACACACCCTTAAGCATGATAGATTCCTTCTCACCGCTGTTAAACTTTCTGCTTCTGCTACGCTTCCTTCATCCGCCACTGCCTCTAATCAAACCACTCCTTCACCGCTATCAACCACACTTCCTCCCTTTTCCACCACCATCAACAACAAGGTTGCTGTGGAAGGGACTGCTGCCACAAGTGTTGGTAGCAGCATATCAGAGTATTTGATAGAGACTCTCCCGGGGTGGCAGCTTGACGATATTCTCGATTCATATTCTCTTTCCAATGGTTTCTGTAAGAGTGATGAAGTGTTTCCACGGTTTGATGGTGGTGACATGGAGGGGCATATGGGTTCGTTCTCGACGGAGAGCATGGGGATCTGGGTTCCTCAAGCGCCGCCACCTCTTGTGTGTTCTTCTCAAGGTGAGACCAACAACAAAGGTAGCAGCAGATCGAGGTTGAAGGATGATACTTTCACTGTTCCACAGATTAGTCCTCCCTCCAATTCCAAGAGAGCCAGATTTCTA 867 0.5052 MSIGQPPRCLYSLPFPLSSLLSTLNLHSYPMKIQCDVCNKHEASVFCTADEAALCAACDHRVHHANKLASKHQRFSLLRPSPKQHPLCDICQDKTAFTFCQQDRAILCKDCDVSVHSANEHTLKHDRFLLTAVKLSASATLPSSATASNQTTPSPLSTTLPPFSTTINNKVAVEGTAATSVGSSISEYLIETLPGWQLDDILDSYSLSNGFCKSDEVFPRFDGGDMEGHMGSFSTESMGIWVPQAPPPLVCSSQGETNNKGSSRSRLKDDTFTVPQISPPSNSKRARFL 289
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mupr12813g00001 289 CDD Bbox1_BBX-like 35 77 - -
Mupr12813g00001 289 FunFam B-box zinc finger protein 21 31 128 - -
Mupr12813g00001 289 CDD Bbox1_BBX-like 87 130 - -
Mupr12813g00001 289 PANTHER B-BOX ZINC FINGER PROTEIN 22 31 282 - -
Mupr12813g00001 289 MobiDBLite consensus disorder prediction 142 161 - -
Mupr12813g00001 289 MobiDBLite consensus disorder prediction 268 283 - -
Mupr12813g00001 289 Gene3D Classic Zinc Finger 31 125 - -
Mupr12813g00001 289 ProSiteProfiles Zinc finger B-box type profile. 83 130 IPR000315 GO:0008270
Mupr12813g00001 289 SMART bboxneu5 83 130 IPR000315 GO:0008270
Mupr12813g00001 289 SMART bboxneu5 30 77 IPR000315 GO:0008270
Mupr12813g00001 289 MobiDBLite consensus disorder prediction 244 289 - -
Mupr12813g00001 289 Pfam B-box zinc finger 84 123 IPR000315 GO:0008270
Mupr12813g00001 289 Pfam B-box zinc finger 34 74 IPR000315 GO:0008270
Mupr12813g00001 289 ProSiteProfiles Zinc finger B-box type profile. 30 77 IPR000315 GO:0008270
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mupr12813g00001 Mupr-Chr12813 5258 6494 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12813g00001 31 288 C2C2-CO-like Transcription Factor Family AT1G75540 44.954 7.79e-76 233
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Mupr12813g00001 zf-B_box 1.6e-06 No_clan