LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr12812g00003	ATAAAACGCAATTCGTCTTCTCCTGCGATTCTCATTAAGCTAGCTACCTCGGTGCAACCTTTCACCCTCTTTTATTCCCTGGTCCCCCTAAATCTTCACATAATGGCGGCAAAACGGTTTTTCGATCATTCTGATCAAGACACTAATAAGTCAGGCGATAAACGGATGAAAACTACAAGACCTTCTTTTGCCTCGGTGATTGGAGAAGTCGTCATGGTGAAAAACTTGCAGAACCTATTCTCAGGCTTGGAGCCCTTGCTTAGAAGAGTGGTTAACGAAGAGGTGGAGCGAGTGATGACGCATTGTGTTCCAGTTCCACGGTCAATAACTAGGTCCCCTTCGTTGAGGATCGAAGCATTGGAGCAACCATCAAGCTATGAACTAATGTTCAGCAAAAAGCTATCACACCCTATATTCACGGGAAGTAGAATACAAGACATAGATGGGAATCCAATCCACGTGGTTCTCGTTGACAAAAGTGGTGGTCAAATGGTTCCCACGAGTCTCCCCCATCCAATAAAGCTAGAGATTGTGGTGCTGGATGGAGATTTTGCTAGTGGTGGTGATAACAACGAGTCGTGGACGAGTGAGGAATTCAACAACCATATAGTGAAGGAGAGAACAGGGAAGAGGCCGTTGTTGACAGGAGAATTGAACCTGACGATGAGGGATGGGATTGCACCAATTGAGGACATTGAATTTACGGATAATTCTAGTTGGATTCGAAGCAGAAAGTTCAGAGTTGCCGTCAGGGTGGCTCCTGGGAGTAATCTAACTCTCCGAATTCGTCAAGGCATGACTGAGCCATTTGTCGTTAAGGATCACCGTGGTGAACTGTACAAGAAACATCACCCACCTATGCTCCACGACGAAGTGTGGCGCCTAGAGAAGATTGGAAAAGACGGAGCTTTTCACAAAAAATTGTTTAACGAGGGGATTAACAGTGTGCAAGACTTTCTTAAGTTATCCATTGTTGATCCTCATAAGCTCAGAAAGATTTTGGGCGTTGGGATGTCAGAGAAAATGTGGGATGTGACAATCAAGCATGCAAAGACTTGTGAGAAGGGCAACAAATTATACGTCTACCGTGGACCTAATTTCACCATATATCTGAATGCTATATGCCAATTGGTTAGAGCTAATATCAACGGCCAAATTTTTCCGGGCAGAGATCTAACCAACATGACCAGGAGCTATATAGAGAAATTGCTTAGAGAAGCACATGCTAGATGGAATGACTTGGAGGAAATTGATGGGGCTTTGTTAACCCAAGGTGAAAGTGTGGAGCAATTTCCAAATAATCATCAAGCATCAGTAATAGCTTATGATGAGAACGATTATTACGGTGATAAATCTACAGAAGCTGGCAACTATGTACCAAGCCATAATAATGCACAAATCGGGTGCAGCGAGTGGGCAATGAATGCAACATTTGGCACAACATCATTCGTGAATGGCATGCCTTACAGCTTCTCAGATTCACAATCGGACAGTGACATAGCGCCCTCAGTTGATGGTGCCGCA	1524	0.4416	IKRNSSSPAILIKLATSVQPFTLFYSLVPLNLHIMAAKRFFDHSDQDTNKSGDKRMKTTRPSFASVIGEVVMVKNLQNLFSGLEPLLRRVVNEEVERVMTHCVPVPRSITRSPSLRIEALEQPSSYELMFSKKLSHPIFTGSRIQDIDGNPIHVVLVDKSGGQMVPTSLPHPIKLEIVVLDGDFASGGDNNESWTSEEFNNHIVKERTGKRPLLTGELNLTMRDGIAPIEDIEFTDNSSWIRSRKFRVAVRVAPGSNLTLRIRQGMTEPFVVKDHRGELYKKHHPPMLHDEVWRLEKIGKDGAFHKKLFNEGINSVQDFLKLSIVDPHKLRKILGVGMSEKMWDVTIKHAKTCEKGNKLYVYRGPNFTIYLNAICQLVRANINGQIFPGRDLTNMTRSYIEKLLREAHARWNDLEEIDGALLTQGESVEQFPNNHQASVIAYDENDYYGDKSTEAGNYVPSHNNAQIGCSEWAMNATFGTTSFVNGMPYSFSDSQSDSDIAPSVDGAA	508

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr12812g00003	508	Pfam	Calmodulin binding protein-like N-terminal domain	126	275	IPR046831	-
	Mupr12812g00003	508	PANTHER	OS02G0177800 PROTEIN	35	464	IPR012416	GO:0005516
	Mupr12812g00003	508	Pfam	Calmodulin binding protein C-terminal domain	358	417	IPR046829	-
	Mupr12812g00003	508	Pfam	Calmodulin binding protein central domain	287	353	IPR046830	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr12812g00003	Mupr-Chr12812	28344	31858	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr12812g00003	37	422	Calmodulin-binding Proteins	AT5G57580	48.338	3.42e-118	360

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr12812g00003	-		-	gmx:100802257	785.793