Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12812g00002 ATGTTCAAAATTCAATTTGTTTGCGTTGTTCCTGCTCTGTTTCTCTTTTTCACCACTACCTCTGGCAGCCACAACAGTTCATCATCCTCAACAACTTGCCCTACATACCGCTGCAGAAATGGACCTAATATCAGTTACCCTTTTTGGCTTTCCCAAGGCTCCCCTCCCGACCAATATTGCGGTTACTCAGAATTTGGCCTTGTGTGTGATAACCACGGTTACCCCATTTTTGCTCCACCCCCCGGATTATACTATTACGTTAAAGACATAGACTACGAAAACCATAGTCTTAAGCTGGTTGATTTTGACACTGCAAACCAAACTTGTCCAAGGGCACTTCACAAGGTTCCCTTGGGCAACCTACCACTTTCTCATTCCCCTTTGAACTTAAACCTTAGCTTTTACTACAACTGCAGTCACCACCCTTCTGGTGTGCCTTCTATCAAGTGTCTCAGTTCTGGGGTAAACGAGTCTTTTGTGTTTCTGATGGGGAACGAGACCAAAGGTTTTGACTGGTTGGGGAACTGCGAGGCAAACGTTGTGGTGACAGTGATGAAGGATGAGATTACAAGCGATGGTGACTTGATTAACGAGTTTGCTGGGGCCATGAACCAAGGCTTCGTGCTTGAATGGCAAACACCTGCCACTTGCGTTGACTGCCAGGACAGGAATGGTGTTTGTGGCTACAGTAACGCCATGAAGGAGTTGCTCTGCTTTTGCAACGATGCCAATTCCTGTCGAGGTATGCTTGCTGGAATCAACACAATCAAAATTCTAAATAGGAAACTTGAAATATTCATCAATACCTTAAGGGGAAGCAGCTCTGGTTTGTCAAGATTAAGTATAGGTTTAATAATAGCTGGAGGAATTGTAGCACTGCTGATATGCACCCTAATTTGTAGTTTTAGACGAAAATTATCACCAATTGTGTCAGAAATTTGGAAGGGCAAAAAGATTAGTCAAGACATTGAGGCCTTCATCAGAAATAATGGACCTCTACCTATAAAAAGATACTCATATTCAGAGATAAAGAAAATGACCAATTATTTTGAATCCAAACTGGGACAAGGTGGATATGGTGTAGTGTATAAAGGAAATCTAAGCAACAACTCTCCTGTGGCAGTGAAGATACTGAACGCTTCCAAAGGGAACGGGGATGAATTTATCAACGAGGTTATAAGCATAAGTAGAACATCCCATGTAAATATTGTTAATCTGCTTGGCTTTTGTCTTGAAGGCAAGAAGAAAGCTCTTGTCTACGATTTTATGCCCAATGGATCACTTGAAAAGTATACACACAAGAAGAATGTTGAAATCAATCCACCTTTGAGTTGGGAAAGATTACACCGCATTGCTGAAGGGATAGCTAAAGGACTGGACTACTTGCATAAGGGGTGCAACACTCGGATATTACACTTTGACATAAAACCAAGCAACATTCTTTTGGACAAAAATTTTTGTCCCAAAATCTCTGATTTTGGGATGGCTAAGCTCTGCTCAGAAACAAACAGTATCATATCTATGTATGGTGCTAGAGGGACAGTTGGTTACATAGCTCCTGAAGTGTGGAACAGAAGCTTTGGGGGAGTGTCATATAAGTCTGATGTGTATAGTTATGGAATGATGATTTTGGAAATGGTTGGAGGAAGGCAAAATATCAGCATTGAAGCAAGTCATTCCAGTGAGACATATTTTCCTCATTGGATATACAAGCATGTTGAGGTGGACAGAAATGTAGCATGGCATGAAGGTATGACCACAGAGGAAAATGAAATTTGTAAGAAAATGATTATTGTAGGATTGTGGTGCATTCAGACAATTCCATCTGACAGGCCTACTATGAGTAGGGTGGTTGAAATGTTAGAAGGAAGCATAGATCGGTTGCAAACTCCACCAAAGCCATTCATATTTACTCCTACTAAAACTGAGGAGGATATTTGCATCACTAGTAGTAGCTGTGATTGA 1965 0.4122 MFKIQFVCVVPALFLFFTTTSGSHNSSSSSTTCPTYRCRNGPNISYPFWLSQGSPPDQYCGYSEFGLVCDNHGYPIFAPPPGLYYYVKDIDYENHSLKLVDFDTANQTCPRALHKVPLGNLPLSHSPLNLNLSFYYNCSHHPSGVPSIKCLSSGVNESFVFLMGNETKGFDWLGNCEANVVVTVMKDEITSDGDLINEFAGAMNQGFVLEWQTPATCVDCQDRNGVCGYSNAMKELLCFCNDANSCRGMLAGINTIKILNRKLEIFINTLRGSSSGLSRLSIGLIIAGGIVALLICTLICSFRRKLSPIVSEIWKGKKISQDIEAFIRNNGPLPIKRYSYSEIKKMTNYFESKLGQGGYGVVYKGNLSNNSPVAVKILNASKGNGDEFINEVISISRTSHVNIVNLLGFCLEGKKKALVYDFMPNGSLEKYTHKKNVEINPPLSWERLHRIAEGIAKGLDYLHKGCNTRILHFDIKPSNILLDKNFCPKISDFGMAKLCSETNSIISMYGARGTVGYIAPEVWNRSFGGVSYKSDVYSYGMMILEMVGGRQNISIEASHSSETYFPHWIYKHVEVDRNVAWHEGMTTEENEICKKMIIVGLWCIQTIPSDRPTMSRVVEMLEGSIDRLQTPPKPFIFTPTKTEEDICITSSSCD 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12812g00002 654 Gene3D Transferase(Phosphotransferase) domain 1 423 631 - -
Mupr12812g00002 654 PANTHER RUST RESISTANCE KINASE LR10-RELATED 318 640 IPR045874 GO:0004672
Mupr12812g00002 654 Pfam Protein kinase domain 351 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12812g00002 654 Pfam Wall-associated receptor kinase galacturonan-binding 33 101 IPR025287 GO:0030247
Mupr12812g00002 654 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Mupr12812g00002 654 SUPERFAMILY Protein kinase-like (PK-like) 329 622 IPR011009 -
Mupr12812g00002 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Mupr12812g00002 654 FunFam serine/threonine-protein kinase PBS1-like 318 422 - -
Mupr12812g00002 654 ProSiteProfiles Protein kinase domain profile. 348 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12812g00002 654 SMART serkin_6 348 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12812g00002 654 Pfam Wall-associated receptor kinase C-terminal 154 242 IPR032872 -
Mupr12812g00002 654 FunFam PR5-like receptor kinase 423 632 - -
Mupr12812g00002 654 Gene3D Phosphorylase Kinase; domain 1 327 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12812g00002 Mupr-Chr12812 17021 19687 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12812g00002 34 636 Receptor kinase-like Gene Family AT5G38260 39.620 4.53e-133 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mupr12812g00002 Pkinase 5.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12812g00002 - - gmx:100781977 960.288