Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12812g00001 ATGCCGGCTGGTCACGGTTTGAGATCTCGCACGAGAGATTCCTTCTCTCGTCCCTTCAGGAAGAAGGGTACCATCGCCCTCACCACCTACCTCAGGACCTACCGCATCGGCGACTACGTCGACATCAGGGTTAACGGTGCAGTTCACAAGGGTATGCCTCACAAGTTCTACCATGGCCGCACCGGACGTGTCTGGAACGTCACCAAGCGCGCCATTGGCGTTGAGGTTAACAAACAGGTCGGACATAGGATTATCAAAAAGAGGATTCATGTGCGTGTGGAGCATGTGATGCCTTCCCGCTGCACTGAGGACTTTCGCCTTAGGAGGATTAAGAATGACCAATTAAAGTATGAAGCTAAGCAGGAAGAGAAGGTTATTAGCACCAAGAGACAGCCTGAGGGTCCTAAACCGGGTTTCATGGTGGAAGGTGCTACATTGGAGACTGTCACCCCCATTCCTTATGATGTCGTCAATGATCTTAAAGGGGGTTACTAG 495 0.5131 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYRIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGHRIIKKRIHVRVEHVMPSRCTEDFRLRRIKNDQLKYEAKQEEKVISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12812g00001 164 SUPERFAMILY Translation proteins SH3-like domain 3 99 IPR008991 -
Mupr12812g00001 164 Gene3D - 99 156 - -
Mupr12812g00001 164 Gene3D Ribosomal protein L21 1 97 IPR036948 GO:0003735|GO:0005840|GO:0006412
Mupr12812g00001 164 PANTHER 60S RIBOSOMAL PROTEIN L21 1 163 IPR001147 GO:0003735|GO:0005840|GO:0006412
Mupr12812g00001 164 FunFam 60S ribosomal protein L21 99 158 - -
Mupr12812g00001 164 ProSitePatterns Ribosomal protein L21e signature. 37 62 IPR018259 GO:0003735|GO:0005840|GO:0006412
Mupr12812g00001 164 FunFam 60S ribosomal protein L21 1 98 - -
Mupr12812g00001 164 Pfam Ribosomal protein L21e 1 101 IPR001147 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12812g00001 Mupr-Chr12812 11775 12615 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12812g00001 1 164 Cytoplasmic Ribosomal Protein Gene Family AT1G09690 78.659 2.72e-99 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12812g00001 K02889 - gmx:100305629 314.309