Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12811g00001 ACAATTATTATTAAGTTAACATCTTATGTTTATTTACAATTCTTTTTAGGTGTTGAGGTGAAAAGTGGAGAATCTCTCAAGGTTGATCCAGGAGATGACAAGATTATCCACCTTTCAAATGCATGCCTTGGGGATGTCACTAAGGACAAAGGAGGTGAACCAGTAGCCCTGTATGTGAAGTTTGGTAACCAGAAGCTTGTACTTGGAACGCTTTCTTCAGATAGATTTCCTCAGATATCTTATGATTTGATATTTGAGAAGGAATTTGAGCTATCCCATAACTGGAAAAATGGGAATTTTGATGAAGATATTCCAGTTAGTGCTGCCAATGGGAAACCTGAGTCTGAGGTGAAGAATGGTGTCAAACTGGATGCAAATGAAGCTAAGAAGAAGGAGAAGATAGCAGATCCAAGAAAGAATGCAAAGGCTAAGGAAAAGGCTGCAAATGGTGAAGATGAAGATTCATCCGAATCTGATTCTGATGCAGATTCAAGTGAAGAAAAGCCCACAGCGAATGGTGACATAGAAAGTAGTGAAGGTGATGATGATAGCGATGATAATGAGGATGATGACGAGGATGATGATGAATCTGATGAGGAGGAGACACCCAAGAAGGTAAAGAAGATGGATTATAAGATTCAAGCAAGCAATAAGAGGGTTATTGACTCTTCTAAGAGAACACATGTCCCTGTGAAGAAGGCAAAATTTGTTACTCCCCAGAAGACT 726 0.3926 TIIIKLTSYVYLQFFLGVEVKSGESLKVDPGDDKIIHLSNACLGDVTKDKGGEPVALYVKFGNQKLVLGTLSSDRFPQISYDLIFEKEFELSHNWKNGNFDEDIPVSAANGKPESEVKNGVKLDANEAKKKEKIADPRKNAKAKEKAANGEDEDSSESDSDADSSEEKPTANGDIESSEGDDDSDDNEDDDEDDDESDEEETPKKVKKMDYKIQASNKRVIDSSKRTHVPVKKAKFVTPQKT 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12811g00001 242 Pfam Nucleoplasmin-like domain 16 94 IPR041232 -
Mupr12811g00001 242 FunFam Histone deacetylase HDT1 13 101 - -
Mupr12811g00001 242 Gene3D Nucleoplasmin core domain 10 104 - -
Mupr12811g00001 242 MobiDBLite consensus disorder prediction 117 153 - -
Mupr12811g00001 242 MobiDBLite consensus disorder prediction 200 227 - -
Mupr12811g00001 242 MobiDBLite consensus disorder prediction 106 227 - -
Mupr12811g00001 242 MobiDBLite consensus disorder prediction 176 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12811g00001 Mupr-Chr12811 3101 5129 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12811g00001 15 145 C2H2 Transcription Factor Family AT5G03740 40.146 1.00e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12811g00001 - - ccaj:109796568 284.648