Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12808g00001 ATGGCACACTCTCTTGTCAGCCTCTTACTCCTCCTCTCTTTCTCCACCCTCGTTCTCACTGACACGGACCCCAACGACGTTAAGATTCTAAATGACTTCAGAAGAGGGTTGAAGAACCCGGAGCTGTTGCCGTGGCCCGAGGAAGGAGGTGACCCGTGTGGCAACCCTCCCTGGAAATACATCTTCTGCAAGGGCAACAGAGTCTCCCAGATTCAGACCAAAAATCTGGGCCTCGTGGGCCCGCTCCCTCCCACCTTCAACCAGCTCTCCATGCTGGAGAATCTGGGCCTGCAGAACAACAAGCTCAACGGCCCATTACCCTCCTTCCGCCACTTATCCAACTTGAAATATGCCTTTCTCAACTTCAACGACTTCAATTCCATCCCCCAAGATTTCTTTGATGGACTTTCCAGTCTCGAGGTCCTGGCCTTGGACTACAACAACCTCAATGCCACCGCCGGTGGCTGGACGTTTCCCACAATGCTGCAGGGTTCCGCGCAGTTGAGGAATCTCTCTTGCATGAGTTGCAATTTAGTGGGCCCCATCCCCGGGTTTCTCGGCAACATGGCCTCGCTGTCGGTGCTGCAGCTCTCCGGTAACAGCTTGACCGGCGATATTCCGGCCACGTTGAGCTCCGTTCCGGCCCTGCAGGTTCTCTGGCTGAATAACCAGCGCGGTGACGGACTCGCCGGGAAAATCGACGTTGTCGCCACCATGGTTTCGCTAACGAGTTTGTGGCTTCACGGAAACAAGTTTCGAGGAACTATTCCGGCGAACATTGGGGATTTGGTTTCTCTTAAGGATCTCGATCTCAATGGGAACGAGCTTGTTGGGTTAATCCCGCCAGGTTTGAGTCACTTGAAGTTGGAGAGATTGGATTTGAACAATAACCATTTCATGGGTCCGATCCCTGATTTTGCAGCGGGTAAAGTGAGTTTTGGTAACAATAATTTTTGTGAGTCCAAGCCTGGGGTTATGTGTTCGTTTCAAGTGATGGTGCTGTTGGAGTTTCTTGCGGGGTTGGATTATCCTGAGGTTTTGGTTGATTCGTGGAGTGGGAATGACCCGTGTGATGGGCCATGGTTGGGGATAAAGTGCAATGGGGGTGGAAAGGTGGAAATGATTGTTTTGGATAACTTCAATCTTAGTGGTAGTTTGAGTCCTTCTCTTGCCAAGTTGGATTCTCTTGTTGAAATCAGGTTGGGAGGGAATGGTATTAGTGGTAGGGTACCGAGTAATTGGACTAGTTTGAGATCTTTGACATTGTTGGATCTGAGTGGGAATAACATTTCCCTTCCCTTGCCAAGTTTTTGGAAAGGATTGAAACTTGTTATTGATGGGAATCCAAAGTTAAGTGCCCCAGAAGTTTCTGTTTCTCCACCAGGGACTGGTTCTGGTTCCTCATCTGGAAAGAGTGAGCCTCAGCATAACCCTAATCCATCTGAAGACTCTAGTCCCAATCCCAAGTCCAGTAGTTTTCTTGAGTCAAATGGTTTTAAAAGGAAAAGCTTGGTTCCAATTGTGGCCCCTATTGCAGGTGTTGCAGCTGTTGCTTTTCTGCTTGTTCCACTTTACTTGTATTGTTTCAGGAGGAGAAAGGGTGGCTCTGAGGGTCCGGCGTCACTAGTGATTCACCCTAGAGATGGTTCTGATTCGGACAATGTGCTGAAGATTGTTGTTGCTAAAAACAGCAATGGAAGTGTTTCCACGGTGGCTGGCAGCGGGTCTGGGACTGTGAATTATAGTGGGGAGTCTCGTGTCATTGAAGCTGGGAACCTTGTGATATCAGTTCAGGTTCTTCGAAAGGTGACCAAGAATTTTGCACGGGAGAATGAGGTTGGGCGTGGCGGGTTTGGTGTTGTTTACAAGGGAGAATTGGATGATGGGACTGAAATTGCGGTGAAACGAATGGAATCGGGTGTGATTAGCAGCAAAGCCTTGGATGAGTTCCAGTCTGAGATTGCAGTTCTGTCAAAAGTCCGGCACCGGCATTTGGTGTCTCTTTTGGGTTATTCAGTTGAAGGTAACGAGAGGATTCTAGTTTATGAGTATATGCCTCAAGGGGCTCTCAGCATGCATCTTTTCCATTGGAAGAGCTTGCAACTGGAGCCACTCTCTTGGAAAAGGAGGCTCAATATTGCCTTGGATGTTGCTAGAGGAATGGAGTATCTTCATAGTCTGGCTCACCAGATCTTTATTCACAGAGATCTTAAGTCATCAAATATTTTGCTCGGGGACGACTTTAGAGCAAAAGTCTCAGATTTTGGATTGGTAAAACTTGCTCCTGATGGCAAACAATCTGTAGTGACCAGGCTTGCTGGTACATTCGGATACTTGGCACCAGAATATGCAGTGACAGGAAAAGTCACTACCAAAGCAGATGTTTTCAGTTTTGGTGTCGTGCTAATGGAGCTGTTAACTGGATTAATGGCACTCGACGAGGAAAGACCCGAGGAAAGACAATACTTGGCGTCATGGTTCTGGCATATCAAATCAGACAAGGACAAACTAATGGCTGCTGTCGACCCACCTCTTGATGACATAAAGGAAGAAACGTTTGATAGCATTGCCACCGTTGCTGAGTTAGCTGGACACTGCACTGCTAGAGAACCAAACCAAAGGCCAGATATGAGTCATGCTGTGAATGTTCTTGCACCGCTTGTTGAAAAATGGAAACCCTTAGATGATGACACTGAGGAGTATTCTGGCATAGATTATAGTCTTCCCCTCAACCAAATGGTGAAAGACTGGCAGGAGACAGAAGGAAAGGACTTGAGCTATGTGGGTCTACAAGACAGTAAGAGTAGTATCCCTGCAAGGCCTACTGGATTTGCAGAGTCTTTTACTTCTGTCGATGGCCGGTGA 2865 0.4789 MAHSLVSLLLLLSFSTLVLTDTDPNDVKILNDFRRGLKNPELLPWPEEGGDPCGNPPWKYIFCKGNRVSQIQTKNLGLVGPLPPTFNQLSMLENLGLQNNKLNGPLPSFRHLSNLKYAFLNFNDFNSIPQDFFDGLSSLEVLALDYNNLNATAGGWTFPTMLQGSAQLRNLSCMSCNLVGPIPGFLGNMASLSVLQLSGNSLTGDIPATLSSVPALQVLWLNNQRGDGLAGKIDVVATMVSLTSLWLHGNKFRGTIPANIGDLVSLKDLDLNGNELVGLIPPGLSHLKLERLDLNNNHFMGPIPDFAAGKVSFGNNNFCESKPGVMCSFQVMVLLEFLAGLDYPEVLVDSWSGNDPCDGPWLGIKCNGGGKVEMIVLDNFNLSGSLSPSLAKLDSLVEIRLGGNGISGRVPSNWTSLRSLTLLDLSGNNISLPLPSFWKGLKLVIDGNPKLSAPEVSVSPPGTGSGSSSGKSEPQHNPNPSEDSSPNPKSSSFLESNGFKRKSLVPIVAPIAGVAAVAFLLVPLYLYCFRRRKGGSEGPASLVIHPRDGSDSDNVLKIVVAKNSNGSVSTVAGSGSGTVNYSGESRVIEAGNLVISVQVLRKVTKNFARENEVGRGGFGVVYKGELDDGTEIAVKRMESGVISSKALDEFQSEIAVLSKVRHRHLVSLLGYSVEGNERILVYEYMPQGALSMHLFHWKSLQLEPLSWKRRLNIALDVARGMEYLHSLAHQIFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDGKQSVVTRLAGTFGYLAPEYAVTGKVTTKADVFSFGVVLMELLTGLMALDEERPEERQYLASWFWHIKSDKDKLMAAVDPPLDDIKEETFDSIATVAELAGHCTAREPNQRPDMSHAVNVLAPLVEKWKPLDDDTEEYSGIDYSLPLNQMVKDWQETEGKDLSYVGLQDSKSSIPARPTGFAESFTSVDGR 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12808g00001 954 Pfam Protein tyrosine and serine/threonine kinase 610 883 IPR001245 GO:0004672|GO:0006468
Mupr12808g00001 954 CDD STKc_IRAK 613 887 - -
Mupr12808g00001 954 SUPERFAMILY Protein kinase-like (PK-like) 591 884 IPR011009 -
Mupr12808g00001 954 MobiDBLite consensus disorder prediction 453 494 - -
Mupr12808g00001 954 ProSitePatterns Serine/Threonine protein kinases active-site signature. 732 744 IPR008271 GO:0004672|GO:0006468
Mupr12808g00001 954 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Mupr12808g00001 954 Pfam Leucine rich repeat N-terminal domain 332 367 IPR013210 -
Mupr12808g00001 954 FunFam receptor protein kinase TMK1 685 903 - -
Mupr12808g00001 954 MobiDBLite consensus disorder prediction 932 954 - -
Mupr12808g00001 954 SMART serkin_6 607 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12808g00001 954 FunFam Leucine-rich repeat receptor-like kinase 329 454 - -
Mupr12808g00001 954 SMART LRR_typ_2 189 213 IPR003591 -
Mupr12808g00001 954 SMART LRR_typ_2 112 135 IPR003591 -
Mupr12808g00001 954 SMART LRR_typ_2 417 440 IPR003591 -
Mupr12808g00001 954 SMART LRR_typ_2 263 287 IPR003591 -
Mupr12808g00001 954 SMART LRR_typ_2 239 262 IPR003591 -
Mupr12808g00001 954 SMART LRR_typ_2 136 159 IPR003591 -
Mupr12808g00001 954 SUPERFAMILY L domain-like 54 439 - -
Mupr12808g00001 954 Pfam Leucine rich repeat 241 299 IPR001611 GO:0005515
Mupr12808g00001 954 Gene3D Ribonuclease Inhibitor 23 325 IPR032675 -
Mupr12808g00001 954 FunFam Receptor-like kinase TMK4 24 324 - -
Mupr12808g00001 954 ProSiteProfiles Protein kinase domain profile. 607 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12808g00001 954 MobiDBLite consensus disorder prediction 458 494 - -
Mupr12808g00001 954 Gene3D Phosphorylase Kinase; domain 1 575 684 - -
Mupr12808g00001 954 ProSitePatterns Protein kinases ATP-binding region signature. 613 635 IPR017441 GO:0005524
Mupr12808g00001 954 FunFam receptor protein kinase TMK1 569 684 - -
Mupr12808g00001 954 Gene3D Ribonuclease Inhibitor 329 455 IPR032675 -
Mupr12808g00001 954 Gene3D Transferase(Phosphotransferase) domain 1 685 904 - -
Mupr12808g00001 954 PANTHER OSJNBA0070M12.3 PROTEIN 7 954 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12808g00001 Mupr-Chr12808 3561 7034 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12808g00001 78 900 Receptor kinase-like Gene Family AT5G62230 30.057 2.03e-78 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mupr12808g00001 PK_Tyr_Ser-Thr 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12808g00001 K00924 - gmx:100781857 1533.85