Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12803g00008 ATGCAAAAGAGGAAGGGACCCGCACGTGCATTTAAGAATGGGCGCGAAATACTAAGCGCCATAGAGACGGCCTTGTCAGCGGTTCCCTTAGACAATAGGTACGACCAAGAGAGGGAAGACCCATCCAGACCAGTCAAGTCAAGAGCAACTGACCGGCCGACTCGCCAATTGAGACTTGGAACAGTGTCCGACAGCCATACGCCAGGAAGAGGAATTAAGCTTATTCCCTATAGTCAAAGCTTGAGGGGTTGTGTATCAGTCAGCCATGACGATCGAGCACTCATACGTGTATGCAACTACATAACGACTTGTACCTTCCTGAGTCAGGAACGAATTGCATCTGACATGTCAGAGCGCAAGCGAAAAATTCATGTCATGCAGTATCTGCCAAAGGGCCCACTGAACGGCTACATCAAACCTGGTAAACAACAATATGTAACGCTTCTGGTTGGGGACAGATCATGGAGGGTTAAACTGGTCCATTACCAAAATAAATCAGAAAGTTACTTCACTTCACATTGGCCAGTTTTTGCAAGGGAAAACGATTTAAAAGTAGGAGATGCTTGCCTGTTCCAACTCCTAAACAGTAGTGATGACATGGTGATGAAGTATGTTTGGATCGAAGATGGAATAGAGGGAAATGAAGGGGGAAGGATGGAACATATAGGATGA 672 0.4613 MQKRKGPARAFKNGREILSAIETALSAVPLDNRYDQEREDPSRPVKSRATDRPTRQLRLGTVSDSHTPGRGIKLIPYSQSLRGCVSVSHDDRALIRVCNYITTCTFLSQERIASDMSERKRKIHVMQYLPKGPLNGYIKPGKQQYVTLLVGDRSWRVKLVHYQNKSESYFTSHWPVFARENDLKVGDACLFQLLNSSDDMVMKYVWIEDGIEGNEGGRMEHIG 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12803g00008 223 ProSiteProfiles B3 DNA-binding domain profile. 153 208 IPR003340 GO:0003677
Mupr12803g00008 223 Gene3D - 102 208 IPR015300 -
Mupr12803g00008 223 SUPERFAMILY DNA-binding pseudobarrel domain 128 204 IPR015300 -
Mupr12803g00008 223 MobiDBLite consensus disorder prediction 29 63 - -
Mupr12803g00008 223 MobiDBLite consensus disorder prediction 32 53 - -
Mupr12803g00008 223 CDD B3_DNA 112 193 IPR003340 GO:0003677
Mupr12803g00008 223 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 104 202 IPR044837 -
Mupr12803g00008 223 SMART B3_2 107 207 IPR003340 GO:0003677
Mupr12803g00008 223 Pfam B3 DNA binding domain 128 199 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12803g00008 Mupr-Chr12803 15492 16511 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12803g00008 126 198 REM Transcription Factor Family AT1G49480 30.137 4.67e-07 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mupr12803g00008 B3 5.4e-11 CL0405