Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12802g00002 ATGGTGTCCAAAAACCCCAACCCCTCTGAGGCTTTCTACTTGGACCCCTCTGCCACCTCGCTCCCGGGCCTCCTCCCCTTCTCCGCCGCCGATTCCCATGATGACCCTGCTAAGAAGACTCGTAAACCTTACACTATCACCAAGTCTAGGGAGAGTTGGACCGAACCCGAGCACGACAAGTTTCTCGAAGCTCTTCAATTGTTTGACCGTGACTGGAAAAAGATTGAAGCATTTGTGGGATCGAAGACAATACGTAGCCATGCCCAGAAATACTTTCTAAAAGTTCAGAAGAGTGGGACAAGTGAACATCTTCCTCCACCCAGACCAAAAAGAAAAGCTGCTCATCCATATCCTCAGAAAGCTTCAAAAAATGCTCCAGTACTCTCACAAGTATCAGGATCCTTTCAATCTTCATCAGCTTTGCTTGAACCAGGATACATAATAAAGCATGATTCTTCAGCAATGCCTAAAACTCCTATTATTAACACTGCAGTGTCTTCCTGGTCAAACAATTCTCTGCAGAAAACCAGCAATGTATTGCATGGACAAAAAGTGAATAATTGTTGCAGTGACAGTGCAAGTCCTAGAGCACAGTTGGTTGGTGAATCTAATGTTCTTCCAGATTTTGCTAAAGTATACAGCTTCATTGGCAGTGTATTTGATCCAAATTTAACTGGACATCTACAGAAACTAAAAAGGATGGACCCTATAGATGTTGAGACGGTGCTATTGTTGATGAGAAACCTGTCTATCAATTTAACAAGCCCAGATTTTGAGGACCATAGAAAGCTGCTTGCATCATATGAGGTGGAACCTGAGACAGATAACTATATCAATGCTGATCGAACCATGCTTGATGTGCAGTTGAAGAGTTCGGCTGGAATTTTGCATGATGAGGTAGGCAAACAAAGTTCAGAGCTCGAATTTGATTCTCCATCTAAACTGCCGCTGAAAGAATTCAATTCCAACTCCCGCGACATGGAGGCCGATACGGTTCATCACTTCTATGCAATAGTTGATGAACATCATTCGGAATCTTGA 1041 0.4332 MVSKNPNPSEAFYLDPSATSLPGLLPFSAADSHDDPAKKTRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTIRSHAQKYFLKVQKSGTSEHLPPPRPKRKAAHPYPQKASKNAPVLSQVSGSFQSSSALLEPGYIIKHDSSAMPKTPIINTAVSSWSNNSLQKTSNVLHGQKVNNCCSDSASPRAQLVGESNVLPDFAKVYSFIGSVFDPNLTGHLQKLKRMDPIDVETVLLLMRNLSINLTSPDFEDHRKLLASYEVEPETDNYINADRTMLDVQLKSSAGILHDEVGKQSSELEFDSPSKLPLKEFNSNSRDMEADTVHHFYAIVDEHHSES 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12802g00002 346 FunFam protein REVEILLE 6 isoform X1 52 97 - -
Mupr12802g00002 346 CDD SANT 52 92 IPR001005 -
Mupr12802g00002 346 MobiDBLite consensus disorder prediction 95 125 - -
Mupr12802g00002 346 MobiDBLite consensus disorder prediction 24 52 - -
Mupr12802g00002 346 NCBIfam myb-like DNA-binding domain, SHAQKYF class 48 94 IPR006447 GO:0003677
Mupr12802g00002 346 Gene3D - 53 97 - -
Mupr12802g00002 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 45 96 IPR017930 -
Mupr12802g00002 346 PANTHER SWI/SNF COMPLEX-RELATED 33 254 - -
Mupr12802g00002 346 SUPERFAMILY Homeodomain-like 44 97 IPR009057 -
Mupr12802g00002 346 MobiDBLite consensus disorder prediction 32 52 - -
Mupr12802g00002 346 Pfam Myb-like DNA-binding domain 50 91 IPR001005 -
Mupr12802g00002 346 ProSiteProfiles SANT domain profile. 48 100 IPR017884 -
Mupr12802g00002 346 SMART sant 49 94 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12802g00002 Mupr-Chr12802 4940 12199 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mupr12802g00002 Myb_DNA-binding 1.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12802g00002 - - gmx:100794389 491.115