Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12790g00001 ATGGTTGGACCAAACTTCTTGGACGAGATAGATTGCGGCAGCTTCTTTGACCACATCGACGACCTGCTTGATTTTCCGGTCGAGGACGTCGACGGCGCCGCCGCCACCTTGCCGTCTGTCGCCGCCGCCGGGAACTGCAACTCGCTGGCGAGCATCTGGCCCGCCGAGTCCGAGTCATTTCCCGGCTCCGACTCGGTGTTTTCCGGCAACAGCGCCTCGGACCTCTCGGCGGAGCTCTCCGTTCCGTATGAAGACATTGTGCAATTGGAATGGCTGTCGAACTTTGTGGAGGATTCGTTCTGTGGGGGGAGCCTGAGCATGAAGAAAGTGGAGGAGCCATCATCATGCACCACCAAAGAGGAGTCAGTGCACAACCAATTCCACACATCAAGCCCTGTTTCTGTCCTTGAAAGCAGCAGTTCTTGCTCCGGTGGGAAGGCTGCGCCGCCGCACAGCCCGGAGGTTTACATTCCAGTGCCATGTGGACGTGCACGCAGCAAGCGTCCACGTCCAGCAGCATTCAATCCTCGGCCTGCCATGAACCTGATTTCCCCTGCCTCGTCTTTTGTTGGGGAGAACATGCAGCCTAATGTCATCTCCTCCAAGGCCTCTTCAGATTCTGAGAATTTTGCTGAGTCTCAACCTGTCCCCAAGATGCCAATGCAAGCTGCTTCTGGGGAGCCTAAGAAGAAAAAGAAAGTGAAGCTGCCAGTGCCAGTAGGTCCAGCTGATAGCAGCAGCCAAAATGCTTCACAACCAGTTAGGAAATGCATGCATTGTGAGATAACCAAGACACCACAGTGGAGGGCAGGGCCAATGGGGCCAAAAACACTATGCAATGCATGTGGTGTTCGTTACAAGTCCGGCCGCCTCTTCCCCGAATACCGCCCTGCTGCAAGTCCAACTTTCTCCCCATCCTTGCACTCCAATTCCCATAAGAAGGTCCTGGAAATGAGATGCAGGGGCATTGACAAATCTGCTTTTGCTATCAATTCAGCTGCCTCACCTGAACTTATTCCAAACACTAACAGCAGCCTTACCCTGGATTACATGGTTGGACTGGGGAATAGGAGCAATAGA 1080 0.5398 MVGPNFLDEIDCGSFFDHIDDLLDFPVEDVDGAAATLPSVAAAGNCNSLASIWPAESESFPGSDSVFSGNSASDLSAELSVPYEDIVQLEWLSNFVEDSFCGGSLSMKKVEEPSSCTTKEESVHNQFHTSSPVSVLESSSSCSGGKAAPPHSPEVYIPVPCGRARSKRPRPAAFNPRPAMNLISPASSFVGENMQPNVISSKASSDSENFAESQPVPKMPMQAASGEPKKKKKVKLPVPVGPADSSSQNASQPVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFSPSLHSNSHKKVLEMRCRGIDKSAFAINSAASPELIPNTNSSLTLDYMVGLGNRSNR 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12790g00001 360 MobiDBLite consensus disorder prediction 119 146 - -
Mupr12790g00001 360 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 255 314 - -
Mupr12790g00001 360 SMART GATA_3 251 301 IPR000679 GO:0006355|GO:0043565
Mupr12790g00001 360 FunFam GATA transcription factor 246 334 - -
Mupr12790g00001 360 PANTHER GATA TRANSCRIPTION FACTOR 15 322 - -
Mupr12790g00001 360 PIRSF Txn_fac_GATA_plant 4 344 IPR016679 GO:0003677|GO:0005634|GO:0045893
Mupr12790g00001 360 CDD ZnF_GATA 256 305 IPR000679 GO:0006355|GO:0043565
Mupr12790g00001 360 Gene3D - 252 301 IPR013088 GO:0006355|GO:0008270
Mupr12790g00001 360 MobiDBLite consensus disorder prediction 117 151 - -
Mupr12790g00001 360 Pfam GATA zinc finger 257 290 IPR000679 GO:0006355|GO:0043565
Mupr12790g00001 360 ProSitePatterns GATA-type zinc finger domain. 257 282 IPR000679 GO:0006355|GO:0043565
Mupr12790g00001 360 ProSiteProfiles GATA-type zinc finger domain profile. 251 287 IPR000679 GO:0006355|GO:0043565
Mupr12790g00001 360 MobiDBLite consensus disorder prediction 199 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12790g00001 Mupr-Chr12790 426 2528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12790g00001 19 319 C2C2-Gata Transcription Factor Family AT4G32890 37.294 6.32e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr12790g00001 GATA 6.2e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12790g00001 - - gmx:100815693 602.823