Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1278g00004 ATGCAGAGAGAGAGAGAGAGAGCGTGTCCATTTCTATGGGCTAGCCAGCTGCAAATGTCACGGCTCATTAGTTACTCGTTGGATTTTGTGTATCTAAGTATAGCAATATTGTTTTCATCCTGGACAGAGGTAGCTTGTTGGATGCATACTGGGGAACGTCAAGCTGCAAAGATGAGAATGGCTTATTTAAAGTCGATGCTGAATCAAGATATAGGCCTATTTGATACCGAGGCATCAACAGGAGAGGTCATTTCTGCCATTACCAGTGACATTATCATTGTTCAAGATGCACTATCCGAGAAGGGTTGA 309 0.4304 MQRERERACPFLWASQLQMSRLISYSLDFVYLSIAILFSSWTEVACWMHTGERQAAKMRMAYLKSMLNQDIGLFDTEASTGEVISAITSDIIIVQDALSEKG 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1278g00004 102 Pfam ABC transporter transmembrane region 20 101 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr1278g00004 102 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 14 102 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr1278g00004 102 SUPERFAMILY ABC transporter transmembrane region 18 99 IPR036640 GO:0005524|GO:0016020
Mupr1278g00004 102 PANTHER ABC TRANSPORTER B FAMILY 22 101 IPR039421 -
Mupr1278g00004 102 Gene3D ABC transporter type 1, transmembrane domain 12 102 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1278g00004 Mupr-Chr1278 25692 26975 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1278g00004 19 101 Calmodulin-binding Proteins AT2G36910 51.807 1.03e-24 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1278g00004 K05658 - gmx:100810688 151.754