Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12787g00001 GAAAATTTTAATGATTTATATGTTGTGAAAGTGGGTGAGTTACAGCAGCAACATCAAGAAGCAATGGACGAAAGCAGCGGCAGCAGCAGCAGCAGCAGCAACTTTAACTACATTCTCCCCGGAATCAGAAATGTCAGATTTAGTTCTTCTAACGAGTCGGGTTATGATGTGGATGGCGGTTTAGTGGATTGTCCAAATGTTGAGTCTTGTTCATCCCATTATGATACAAACACTAGACAAACGAATGAAAGCAAAGCCTTCACATTTTCTGAGGTGAATTGCATTTATGCAAGCACAAGTGAAATTTTCTGTTCCCATTTCTCATCTGATGGGAAATTACTTGCAAGTGGTGGCTCTGACAAAAAGGCTGTTTTGTGGTACACAGATTCTCTTAAAAGAAAAGCTATTCTTGAAGGGCATGTATCTTCGATCAGTGATGTCCGTTTCAGTCCAAGCATGCCTCGTCTTGCAACATCTTCATTTGACACAACCATCAGGGTTTGGGATGTTGACAACCCTGTGACTGGGTATTCACTTCCCACCTTTACGGCACATTCAGCTGTTATGTCAGTAGATTTTCATCCAAATATGAATGACCTTGTCTGCTCTTCTGATGCTAATGGTGACATACAATATTGGATCCTAAGCAGTCCCAATTGTGTTAGAGTCTTCAAGGGTGCCATTAACCGGATAAGATTCCAACCTCGTATAGGGAGGTACCTTGCTGCAGCTGCACACAACATTGTGTCTATATTTGATGTGGAGACACAAGCAGGTCTATATTCATTAAAGGGACACGTATATGCGGTACTTTGTCTGTGTTGGGACCCTTCTGGGGAGTTGCTGGCATCTGTGAGTGTGGACTCTGTGAGGGTTTGGAATCTTAGATCAGGGGAATGTATTCGTGAACTAGTTAGCGGCAAAGTCAATAAGTTTTATTCATTACCCTTCATTGCTGATCATTGGCTGTTACCGGGCAAGTATTTCCATTTTGTTTATGATGCTTATGACCTTGTGCTTTCATTGGTGCTGTGGAACACAAGCGAGAGCAGAATGTTGACTCTGCCTGCTCATGATGATCATATCACTTCATTGGCTGTTTCAACTGTAAATGGTTTGGTTGCTTCTGCCAGTTATGACAGGTTCATCAAGCTCTGG 1158 0.424 ENFNDLYVVKVGELQQQHQEAMDESSGSSSSSSNFNYILPGIRNVRFSSSNESGYDVDGGLVDCPNVESCSSHYDTNTRQTNESKAFTFSEVNCIYASTSEIFCSHFSSDGKLLASGGSDKKAVLWYTDSLKRKAILEGHVSSISDVRFSPSMPRLATSSFDTTIRVWDVDNPVTGYSLPTFTAHSAVMSVDFHPNMNDLVCSSDANGDIQYWILSSPNCVRVFKGAINRIRFQPRIGRYLAAAAHNIVSIFDVETQAGLYSLKGHVYAVLCLCWDPSGELLASVSVDSVRVWNLRSGECIRELVSGKVNKFYSLPFIADHWLLPGKYFHFVYDAYDLVLSLVLWNTSESRMLTLPAHDDHITSLAVSTVNGLVASASYDRFIKLW 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12787g00001 386 Gene3D - 337 386 IPR015943 GO:0005515
Mupr12787g00001 386 ProSiteProfiles Trp-Asp (WD) repeats profile. 355 386 IPR001680 GO:0005515
Mupr12787g00001 386 Gene3D - 185 313 IPR015943 GO:0005515
Mupr12787g00001 386 Gene3D - 69 184 IPR015943 GO:0005515
Mupr12787g00001 386 ProSiteProfiles Trp-Asp (WD) repeats profile. 263 303 IPR001680 GO:0005515
Mupr12787g00001 386 SMART WD40_4 256 294 IPR001680 GO:0005515
Mupr12787g00001 386 SMART WD40_4 88 127 IPR001680 GO:0005515
Mupr12787g00001 386 SMART WD40_4 217 253 IPR001680 GO:0005515
Mupr12787g00001 386 SMART WD40_4 130 169 IPR001680 GO:0005515
Mupr12787g00001 386 SMART WD40_4 348 386 IPR001680 GO:0005515
Mupr12787g00001 386 SMART WD40_4 175 214 IPR001680 GO:0005515
Mupr12787g00001 386 ProSitePatterns Trp-Asp (WD) repeats signature. 156 170 IPR019775 -
Mupr12787g00001 386 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 137 172 - -
Mupr12787g00001 386 ProSiteProfiles Trp-Asp (WD) repeats profile. 95 126 IPR001680 GO:0005515
Mupr12787g00001 386 Pfam WD domain, G-beta repeat 352 386 IPR001680 GO:0005515
Mupr12787g00001 386 Pfam WD domain, G-beta repeat 92 126 IPR001680 GO:0005515
Mupr12787g00001 386 Pfam WD domain, G-beta repeat 135 169 IPR001680 GO:0005515
Mupr12787g00001 386 Pfam WD domain, G-beta repeat 260 294 IPR001680 GO:0005515
Mupr12787g00001 386 ProSiteProfiles Trp-Asp (WD) repeats profile. 137 172 IPR001680 GO:0005515
Mupr12787g00001 386 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 355 386 - -
Mupr12787g00001 386 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 16 386 IPR044716 GO:0003714
Mupr12787g00001 386 SUPERFAMILY WD40 repeat-like 88 386 IPR036322 GO:0005515
Mupr12787g00001 386 CDD WD40 91 386 - -
Mupr12787g00001 386 PRINTS G protein beta WD-40 repeat signature 114 128 IPR020472 -
Mupr12787g00001 386 PRINTS G protein beta WD-40 repeat signature 156 170 IPR020472 -
Mupr12787g00001 386 PRINTS G protein beta WD-40 repeat signature 374 386 IPR020472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12787g00001 Mupr-Chr12787 1270 3294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12787g00001 113 310 U-box Gene Family AT2G33340 29.126 3.73e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12787g00001 - - gmx:100805628 393.275