Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12779g00001 ATGGTCCAAATGACCACAGAGCACCCGTCTATTTGTCCGGCAGCAGTTCCTGGATCAGCACCATCCTCCCTCATCCTCTCTGCGCTTCCAACACTGCAACAGGGTTCCATCCGCCCTCCCGCCTCAGATGCAGACTCTCCCTCCCTTCTCTTGCATCAGAGGTTCCTTCTGCTGCTCCACATGGATTTCCCTCCCGGCTTCAATTTTCTCACCCAATTCGGTTGCGGCTTCGTTCTTCTCCGCTCCCTCTCTCGCCTCTTCAACATTCTCGGCCTCCTTTTAATATTCACCTTCTGCTTCAAGGTTCTCCGCTCCGTCTGGCATTTCAAGGCCGCCATCCGCTTCCTCTGTGACTCCGGGGGCGTCCCCAAGATCCGTTTCTGCCTCGACAACGTCGTCTCCAAATCAAAGCCCAGGCCTTTCAAGAAACCGCGCCACCCCGGTTCCAAATCCTTCCGGAAACGCCCCAATGCCGTTTCCGAAGATGGGCCCGACGGGAAGGCCGACAATGAGAGAGAGCTCTGGAATGAGGACGAGGTGTTCGACGAAGTGACGCTCAGAAAAATTGTTAAGATGGAGCGGCAGAAGGCCAATGCGGCCTGTGCTGACCTCGACAAGGAAAGGACGGCGGCCGGGTCCTCGGCGGAGGAGGCCATGGCCATGATTTTACGGCTGCAGAACGAGAAGAGCACTGCGGAGATTCAGGCCACGCAGTTCCGGCGAATGGCGGAGCAGAAGCTGGATTACGATCAGGAAGTGATTGAATCGTTGCAGTGGACGATCACGCAGCACGAGTTTCAGAAGAGTGACTTGGAGGATCAGTTGGGGATTTGTAGGGAGGATCTGAGGCAGTTTATGAGGGATGATGAAATAGACCAATTTGACGTTGAACTGAGTAGGGGTTTTGTGTATGATGATCCTGATTCTAATTCAGTAGTGAGGAAGATGAAATTTATGAGGCCTCAGATCTCTGCCTTGGAAAGGTCCCATTTGTCAACAGCTGATGAACCATCTTCCATTAAGGTCAATCCCCCGAGGGTTCCAAATCTTATTGGGGGCAGTTTTGTTGACTCAAAATCATCAACTTTCATTGATGTTATAAACCCAGCAACCCAAGAAGTTGTTTCACAAGTTCCTTTGTCGACGACTGAAGAGTTTAAGGCAGCTGTATCTGCGGCAAGGAATGCATTTCCATCATGGCGTAACACTCCAATTACAACACGGCAACGTGTTATGTTGAAGCTCCAAGAGCTTATACGCAGAGATATGGATAAACTTGCTCTGAATGTGACTACTGAACAAGGAAAGACATTGAAGGATGCACAAGGAGATGTATTTCGTGGTTTAGAGGTGGTGGAACATGCTTGTGGGATGGCAACTCTACAAATGGGGGAGTATGTTTCCAATGTATCACATGGAGTTGATACTTACAGCATTAGAGAACCACTTGGTGTTTGTGCTGGTATTTGTCCTTTCAACTTTCCTGCAATGATTCCCTTGTGGATGTTCCCTGTGGCTGTTACCTGTGGTAATACCTTTGTTCTAAAACCATCAGAGAAAGATCCAGGTGCTTCTGTAATGCTTGCAGAATTGGCATTGGAGGCTGGTTTGCCTGACGGTGTTTTAAATATAGTTCATGGAACCCATGATATTGTGAATGCTATTTGCGATGATGACGATATCAAAGCCATATCTTTTGTTGGTTCAAATGTTGCTGGAATGCACATATATGCAAGAGCAGCAGCTAAAGGGAAACGTGTTCAGTCTAACATGGGAGCCAAAAATCATGCAATTGTCATGCCAGATGCAAATGTTGATGCTACTCTAAATGCTTTAGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGGGAAGCTAAACTTATAGAGCGTGCCAATGCGCTAAAAATAAATGCTGGAACTGAACCTGATACAGACCTTGGTCCAGTGATCAGCAAACAGGCAAAGGAGCGAATACACAGATTAATTCAATCTGGGGTTGAAAGTGGTGCCAGACTACTGCTTGACGGAAGAGATATAGTGGTCCCAGGATATGAATCTGGCAATTTTATTGGCCCAACCATCTTAGCAGATGTTCATACTGACATGAAGTGCTACAAGGCTGATAGCTTGGAAGAAGCCATAAACATTATCAACAGCAACAAGTACGGAAATGGTGCTTCTATATTTACTACATCTGGTGTTGCTGCAAGGAAATTTCAGACTGAGATCCAGGCTGGGCAGGTTGGCATCAATGTTCCCATTCCAGTTCCTTTGCCCTTCTTCTCATTTACCGGCAACAAGGCATCGTTTGCCGGTGATCTCAACTTCTATGGCAAGGCAGGGGTTAACTTCTATACACAGATCAAGACAGTAACACAGCAATGGAAGGATTCAACTGGCAGTAGCCAGATTAACTTGGCAATGCCAACCTCTCAAAAGTAA 2442 0.4746 MVQMTTEHPSICPAAVPGSAPSSLILSALPTLQQGSIRPPASDADSPSLLLHQRFLLLLHMDFPPGFNFLTQFGCGFVLLRSLSRLFNILGLLLIFTFCFKVLRSVWHFKAAIRFLCDSGGVPKIRFCLDNVVSKSKPRPFKKPRHPGSKSFRKRPNAVSEDGPDGKADNERELWNEDEVFDEVTLRKIVKMERQKANAACADLDKERTAAGSSAEEAMAMILRLQNEKSTAEIQATQFRRMAEQKLDYDQEVIESLQWTITQHEFQKSDLEDQLGICREDLRQFMRDDEIDQFDVELSRGFVYDDPDSNSVVRKMKFMRPQISALERSHLSTADEPSSIKVNPPRVPNLIGGSFVDSKSSTFIDVINPATQEVVSQVPLSTTEEFKAAVSAARNAFPSWRNTPITTRQRVMLKLQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFVLKPSEKDPGASVMLAELALEAGLPDGVLNIVHGTHDIVNAICDDDDIKAISFVGSNVAGMHIYARAAAKGKRVQSNMGAKNHAIVMPDANVDATLNALVAAGFGAAGQREAKLIERANALKINAGTEPDTDLGPVISKQAKERIHRLIQSGVESGARLLLDGRDIVVPGYESGNFIGPTILADVHTDMKCYKADSLEEAINIINSNKYGNGASIFTTSGVAARKFQTEIQAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTVTQQWKDSTGSSQINLAMPTSQK 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12779g00001 813 MobiDBLite consensus disorder prediction 138 152 - -
Mupr12779g00001 813 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 593 762 IPR016163 GO:0016620
Mupr12779g00001 813 MobiDBLite consensus disorder prediction 155 172 - -
Mupr12779g00001 813 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 351 598 - -
Mupr12779g00001 813 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 592 764 - -
Mupr12779g00001 813 Coils Coil 215 235 - -
Mupr12779g00001 813 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 353 790 IPR016162 GO:0016491
Mupr12779g00001 813 MobiDBLite consensus disorder prediction 136 172 - -
Mupr12779g00001 813 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 349 795 IPR010061 GO:0004491
Mupr12779g00001 813 CDD ALDH_F6_MMSDH 347 795 IPR010061 GO:0004491
Mupr12779g00001 813 SUPERFAMILY ALDH-like 343 796 IPR016161 GO:0016491
Mupr12779g00001 813 ProSiteProfiles GTD-binding domain profile. 181 279 IPR007656 -
Mupr12779g00001 813 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 309 811 IPR010061 GO:0004491
Mupr12779g00001 813 Pfam Zein-binding 185 275 IPR007656 -
Mupr12779g00001 813 Pfam Aldehyde dehydrogenase family 355 623 IPR015590 GO:0016491
Mupr12779g00001 813 Pfam Aldehyde dehydrogenase family 625 791 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12779g00001 Mupr-Chr12779 395 14349 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12779g00001 316 779 Aldehyde Dehydrogenase Gene Family AT2G14170 76.220 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12779g00001 K00140 - gmx:100811544 916.376