Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12778g00002 ATGGAGGGTCATCATCTCCATCACCATCACCGTCAACAACAACATCATCATCATCAACAGCAGCAGCATCACCACCCTCATCACAACATCACAACTAGTGCCAACGTGGATGTGACGGATAGGTTCCCCCAATGGAGCCTCCAAGAGACAAAAGAGTTCCTCGTGATCCGTGCGGAGCTGGATCAGACTTTCATGGAGACAAAGAGGAACAAACAACTTTGGGAAGTCATCTCCAACCAGATGAAGGAAAAGGGTTACCATAGAAGTGCCGACCAGTGCAAGTGCAAGTGGAAAAACCTCGTTACCCGCTATAAGGGATGTGAAACGATGGAGCCGGAGGCGATGAGGCAGCAATTCCCATTTTACAATGAGCTTCAAGCGATTTTCACAGTGAGAATGCAGAGAATGCTGTTGGCTGAGACAGAAGGAGGGTCGAAGAAGAAGGGTGTGCAGCTTTCTTCAGAGGAGGAAGAAGATGGCAACGAAGAGAGCGAGGGGGATCAGAAGGGTAGCATGAGCAGGAAGAAGAAGAAGAAGAAGAAGGGCAAGACGGTAATTGGCGGAGGAAGTGGCAGCAATAGTAACATGGAGAGTTTGAAGGAGATTATGGAGGAGTTCATGAGGCAGCAGATGCAAATGGAGGCGCAGTGGATGGAGGCGTTTGAGGCGAGGGAGAATGAGAGGAGGTTGAAGGAGATGGAATGGAGGCAAACCATGGAGGCGTTGGAGAATGAGAGGATGATGATGGATCAGAGTTGGAGGGAGAGGGAGGAGCAAAGAAGGATTAGAGAAGAAGTTAGGGCTGACAAGAGAGATGCTCTTATCAATGCTCTCCTCAACAAGCTCAGAAGAGAAGAGATGTAG 864 0.4919 MEGHHLHHHHRQQQHHHHQQQQHHHPHHNITTSANVDVTDRFPQWSLQETKEFLVIRAELDQTFMETKRNKQLWEVISNQMKEKGYHRSADQCKCKWKNLVTRYKGCETMEPEAMRQQFPFYNELQAIFTVRMQRMLLAETEGGSKKKGVQLSSEEEEDGNEESEGDQKGSMSRKKKKKKKGKTVIGGGSGSNSNMESLKEIMEEFMRQQMQMEAQWMEAFEARENERRLKEMEWRQTMEALENERMMMDQSWREREEQRRIREEVRADKRDALINALLNKLRREEM 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12778g00002 287 FunFam Zinc finger and SCAN domain-containing 20 45 106 - -
Mupr12778g00002 287 Coils Coil 196 216 - -
Mupr12778g00002 287 ProSiteProfiles Myb-like domain profile. 45 101 IPR001005 -
Mupr12778g00002 287 PANTHER FI21293P1 13 283 - -
Mupr12778g00002 287 CDD GT1 43 108 - -
Mupr12778g00002 287 Gene3D - 45 106 - -
Mupr12778g00002 287 MobiDBLite consensus disorder prediction 1 28 - -
Mupr12778g00002 287 MobiDBLite consensus disorder prediction 1 25 - -
Mupr12778g00002 287 MobiDBLite consensus disorder prediction 142 197 - -
Mupr12778g00002 287 Pfam Myb/SANT-like DNA-binding domain 44 128 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12778g00002 Mupr-Chr12778 16893 18166 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12778g00002 31 285 Trihelix Transcription Factor Family AT5G01380 50.883 1.10e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mupr12778g00002 Myb_DNA-bind_4 3.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12778g00002 - - gmx:100794230 402.905