Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mupr1275g00001 | ATGAAACAAAACTTTGATCTTGAAGTGGAGGCCTCAGCAGAATATGAATCTGAAGTTAGCAGCCAGGTCGCTTCCAATATATCCATTAAAGAAACCACTGCACACCCTTGTGGTGACATCCTCACCAACTCTTCCAATGTCACGAATCCAATAGAACTTCGTCTCTATTCAGATGCTATCTCCCTTGACTTAACTCTCAACTTCAACAACAACGACTTAGTGGTTAGAGATTCAGCAGGACTCTCATTCTCGAGCACTAGTGAGAGCAGCAATGATCCTCCCTCTCAAACTACTTCAGCCAATCCGCGAGTCTTCTCTTGCAACTATTGCAAGCGCAAGTTCTTCAGCTCGCAGGCTCTTGGAGGCCACCAAAATGCACACAAGAGAGAAAGAACATTGGCAAAGAGAGCTATGCGGATGGGGTTTTTCTCAGAGAGGTCCTTAGGGATAAAGGCACACTCTTCACTGCACCATGGTTTTTCACCAACAACAAGGCTCCCTGAGATGAAAAGCAATGCAAGATTTGAGCAAGGGTATATTGGTCTTCCAATGTTCTTGGAGGAGGATGAGGCAGAACTGTGGTGGCAAGGTAGTTACCATCAGGTTCCCACTGAGGGAGGCCATAGTACTCATCAGAATTTCAGAGTGAGTGGAAGTTCAAATTTGAGTTTTGTTGGGGTGAATCCACCTGTTGACATAGAGAACTCAACAACACCTGATAGGACATGCATGCAAGGCAATGGTGCCAGATTGATCAATGTCATCAATAAACTTGCTGGAGCTCATGTAACGTTCAAGAACCAGAACAAAGAATCAAAGATGGTTCACATTAGACTTTCAGTGTCATTTGGATAA | 855 | 0.4433 | MKQNFDLEVEASAEYESEVSSQVASNISIKETTAHPCGDILTNSSNVTNPIELRLYSDAISLDLTLNFNNNDLVVRDSAGLSFSSTSESSNDPPSQTTSANPRVFSCNYCKRKFFSSQALGGHQNAHKRERTLAKRAMRMGFFSERSLGIKAHSSLHHGFSPTTRLPEMKSNARFEQGYIGLPMFLEEDEAELWWQGSYHQVPTEGGHSTHQNFRVSGSSNLSFVGVNPPVDIENSTTPDRTCMQGNGARLINVINKLAGAHVTFKNQNKESKMVHIRLSVSFG | 284 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mupr1275g00001 | 284 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 107 | 127 | IPR013087 | - | |
Mupr1275g00001 | 284 | FunFam | Zinc finger protein 2 | 82 | 149 | - | - | |
Mupr1275g00001 | 284 | SUPERFAMILY | beta-beta-alpha zinc fingers | 102 | 132 | IPR036236 | - | |
Mupr1275g00001 | 284 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 105 | 132 | IPR013087 | - | |
Mupr1275g00001 | 284 | Gene3D | Classic Zinc Finger | 83 | 161 | - | - | |
Mupr1275g00001 | 284 | MobiDBLite | consensus disorder prediction | 82 | 101 | - | - | |
Mupr1275g00001 | 284 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 20 | 160 | IPR044246 | GO:0009788 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mupr1275g00001 | Mupr-Chr1275 | 13918 | 15317 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mupr1275g00001 | 99 | 242 | C2H2 Transcription Factor Family | AT1G66140 | 43.316 | 1.72e-36 | 129 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Mupr1275g00001 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mupr1275g00001 | - | - | gmx:100815175 | 345.51 |