Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1275g00001 ATGAAACAAAACTTTGATCTTGAAGTGGAGGCCTCAGCAGAATATGAATCTGAAGTTAGCAGCCAGGTCGCTTCCAATATATCCATTAAAGAAACCACTGCACACCCTTGTGGTGACATCCTCACCAACTCTTCCAATGTCACGAATCCAATAGAACTTCGTCTCTATTCAGATGCTATCTCCCTTGACTTAACTCTCAACTTCAACAACAACGACTTAGTGGTTAGAGATTCAGCAGGACTCTCATTCTCGAGCACTAGTGAGAGCAGCAATGATCCTCCCTCTCAAACTACTTCAGCCAATCCGCGAGTCTTCTCTTGCAACTATTGCAAGCGCAAGTTCTTCAGCTCGCAGGCTCTTGGAGGCCACCAAAATGCACACAAGAGAGAAAGAACATTGGCAAAGAGAGCTATGCGGATGGGGTTTTTCTCAGAGAGGTCCTTAGGGATAAAGGCACACTCTTCACTGCACCATGGTTTTTCACCAACAACAAGGCTCCCTGAGATGAAAAGCAATGCAAGATTTGAGCAAGGGTATATTGGTCTTCCAATGTTCTTGGAGGAGGATGAGGCAGAACTGTGGTGGCAAGGTAGTTACCATCAGGTTCCCACTGAGGGAGGCCATAGTACTCATCAGAATTTCAGAGTGAGTGGAAGTTCAAATTTGAGTTTTGTTGGGGTGAATCCACCTGTTGACATAGAGAACTCAACAACACCTGATAGGACATGCATGCAAGGCAATGGTGCCAGATTGATCAATGTCATCAATAAACTTGCTGGAGCTCATGTAACGTTCAAGAACCAGAACAAAGAATCAAAGATGGTTCACATTAGACTTTCAGTGTCATTTGGATAA 855 0.4433 MKQNFDLEVEASAEYESEVSSQVASNISIKETTAHPCGDILTNSSNVTNPIELRLYSDAISLDLTLNFNNNDLVVRDSAGLSFSSTSESSNDPPSQTTSANPRVFSCNYCKRKFFSSQALGGHQNAHKRERTLAKRAMRMGFFSERSLGIKAHSSLHHGFSPTTRLPEMKSNARFEQGYIGLPMFLEEDEAELWWQGSYHQVPTEGGHSTHQNFRVSGSSNLSFVGVNPPVDIENSTTPDRTCMQGNGARLINVINKLAGAHVTFKNQNKESKMVHIRLSVSFG 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1275g00001 284 ProSitePatterns Zinc finger C2H2 type domain signature. 107 127 IPR013087 -
Mupr1275g00001 284 FunFam Zinc finger protein 2 82 149 - -
Mupr1275g00001 284 SUPERFAMILY beta-beta-alpha zinc fingers 102 132 IPR036236 -
Mupr1275g00001 284 ProSiteProfiles Zinc finger C2H2 type domain profile. 105 132 IPR013087 -
Mupr1275g00001 284 Gene3D Classic Zinc Finger 83 161 - -
Mupr1275g00001 284 MobiDBLite consensus disorder prediction 82 101 - -
Mupr1275g00001 284 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 20 160 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1275g00001 Mupr-Chr1275 13918 15317 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1275g00001 99 242 C2H2 Transcription Factor Family AT1G66140 43.316 1.72e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr1275g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1275g00001 - - gmx:100815175 345.51