Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12756g00001 ATGGACGCCAACCAGAACACCACTAGTGCATTCACAAATGTGAACAGCACTTGGAATCTTGGAAAGATGGAAACAAATGAACAACAACATGACCATAATGTTATTCTCCAAGTCCAAGACCCTATTATGGGTTCTGGAATTTGGCCCAACAACTACCACAACCTTAACCTTGTTCAAATGCATCAAACACCCTCCACAACAACCTCATCCATGATAGCACCACCCTCCTCCTCAGGGTTCCTCAGTGACATACTAGGCGTGCACAACATAGAAGAAGATGAAGAGCCAGAAGAAGAGCTAGGAGCCATGAAGGAGATGATGTACAAGATCGCTGCTATGCAACCCGTGGACATCGACCCCGCCACTATCCGAAAACCAAAGAGAAGAAACGTTCGCATCAGCGACGACCCTCAGAGCGTGGCTGCACGCCACAGGAGAGAGAGGATCAGCGAGAAAATCCGCATCCTCCAGAGACTCGTCCCCGGGGGGACCAAAATGGACACCGCTTCAATGCTTGATGAAGCCATTCGCTATGTCAAGTTCTTGAAGAGACAAATCAGGTTGCTTCAATCCATTCCTCAAACTTCACAATCACCACAATGCATTGGCCTTGCTAGTACTCATCATGCTAGCACCTTGTTGTTAGCCCCTTCTTGTGACTGGTCTTTTGCACCAAATGTGCTACTCAGTTCCACCGCTGTTTCCGCCGCCGCCACCTCCTCCATGGACATGCCGGCCGGACTCGGATTCGACGGCCATGGTCATGCTTGTGATGGCTCCTCCAGCTATAACCATCATGAGATGATTGTGTGA 813 0.4945 MDANQNTTSAFTNVNSTWNLGKMETNEQQHDHNVILQVQDPIMGSGIWPNNYHNLNLVQMHQTPSTTTSSMIAPPSSSGFLSDILGVHNIEEDEEPEEELGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSIPQTSQSPQCIGLASTHHASTLLLAPSCDWSFAPNVLLSSTAVSAAATSSMDMPAGLGFDGHGHACDGSSSYNHHEMIV 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12756g00001 270 CDD bHLH_AtIND_like 134 191 - -
Mupr12756g00001 270 Pfam Helix-loop-helix DNA-binding domain 143 182 IPR011598 GO:0046983
Mupr12756g00001 270 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 139 196 IPR036638 GO:0046983
Mupr12756g00001 270 FunFam BHLH transcription factor 136 199 - -
Mupr12756g00001 270 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 133 182 IPR011598 GO:0046983
Mupr12756g00001 270 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 17 222 IPR045843 GO:0003700|GO:0006355
Mupr12756g00001 270 Gene3D - 136 200 IPR036638 GO:0046983
Mupr12756g00001 270 SMART finulus 139 188 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12756g00001 Mupr-Chr12756 2316 3869 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12756g00001 102 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 83.146 5.01e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr12756g00001 HLH 1.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12756g00001 - - gmx:100775296 434.491