Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12751g00003 ATGGAACCACAACAAAAAGCAGTGATGGGTAAGGAAAAGGTTCACATCAGTATTGTGGTCATTGGCCATGTCGACTCTGGGAAGTCCACCACCACTGGCCATCTGATCTACAAGCTTGGAGGCATTGATAAGCGTGTTATTGAGAGATTTGAAAAGGAAGCTGCTGAGATGAACAAGAGGTCTTTCAAGTATGCCTGGGTGCTTGACAAGCTTAAGGCTGAGCGTGAAAGAGGAATCACAATTGATATTGCTTTGTGGAAATTTGAAACCACCAAATACTACTGCACTGTCATTGATGCTCCTGGACACAGGGATTTCATTAAGAATATGATTACTGGAACATCCCAAGCTGACTGTGCTGTTCTTATCATTGATTCCACTACTGGTGGTTTTGAAGCTGGAATTTCTAAAGATGGACAGACTCGTGAACATGCTCTTCTTTCATTCACCCTTGGTGTGAAGCAGATGATTTGTTGCTGTAACAAGATGGATGCCACTACACCCAAGTACTCCAAGGCCAGATATGATGAAATTGTGAAGGAAGTCTCTTCCTACTTGAAGAAAGTTGGGTACAACCCTGACAAGATTCCTTTTGTTCCTATTTCTGGTTTTGAGGGAGACAACATGATTGAGAGGTCCACAAACCTTGACTGGTACAAGGGTCCTACCCTTCTTGAAGCCCTTGACCAGATCAATGAGCCCAAGAGGCCATCTGACAAGCCCCTCAGGCTACCCCTTCAGGATGTTTACAAGATTGGAGGAATTGGAACTGTACCCGTGGGACGTGTTGAGACTGGTATAGTGAAGCCTGGAATGGTGGTGACTTTTGCACCAACTGGACTGACAACTGAAGTTAAGTCTGTGGAGATGCACCATGAAGCTCTCACTGAGGCTCTTCCTGGTGACAATGTGGGGTTCAATGTTAAGAATGTTGCTGTAAAGGATCTCAAGCGTGGTTATGTTGCCTCGAACTCAAAGGATGATCCTGCCAAGGAGGCTGCTAACTTCACCTCCCAGGTTATCATCATGAATCACCCGGGTCAGATTGGAAATGGTTATGCCCCTGTTCTGGATTGCCACACCTCTCACATTGCTGTCAAGTTTGCTGAACTTATGACCAAGATTGATAGGCGATCTGGCAAAGAGCTTGAGAAGGAGCCTAAATTCCTGAAGAATGGTGATGCTGGTTTTGTTAAGATGATTCCAACCAAACCTATGGTGGTTGAAACTTTCTCTGAGTATCCTCCACTTGGACGCTTTGCTGTGAGGGACATGCGTCAAACTGTTGCTGTTGGAGTCATCAAGAATGTGGAGAAGAAAGATCCAACTGGAGCCAAGGTGACAAAGGCTGCACAGAAGAAGAATTATGTCCCATTTTATGGTTACAATAAATATTGGCTTCTTGCTTGTACTCTCGTGTCTTCTCTAGGTAGCTTGTTTATCGGACATAGTTTGAAGTCTCCACCATCATCTCGCAACTTCTGTTCCCAGAACTGGGTTCTTGATCGACGGTGGCAAGCCTTCTATTATGGGCCGATATTTTATTTAAGT 1551 0.4475 MEPQQKAVMGKEKVHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLSFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGIVKPGMVVTFAPTGLTTEVKSVEMHHEALTEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELMTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKNVEKKDPTGAKVTKAAQKKNYVPFYGYNKYWLLACTLVSSLGSLFIGHSLKSPPSSRNFCSQNWVLDRRWQAFYYGPIFYLS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12751g00003 517 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 69 84 IPR031157 -
Mupr12751g00003 517 Pfam Elongation factor Tu GTP binding domain 15 230 IPR000795 GO:0003924|GO:0005525
Mupr12751g00003 517 NCBIfam translation elongation factor EF-1 subunit alpha 9 441 IPR004539 GO:0003746|GO:0005525|GO:0006414
Mupr12751g00003 517 PANTHER TRANSLATION FACTOR 11 441 - -
Mupr12751g00003 517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 257 IPR027417 -
Mupr12751g00003 517 Gene3D Translation factors 331 438 - -
Mupr12751g00003 517 Pfam Elongation factor Tu domain 2 256 321 IPR004161 GO:0005525
Mupr12751g00003 517 Gene3D - 1 236 IPR027417 -
Mupr12751g00003 517 Gene3D Translation factors 237 324 - -
Mupr12751g00003 517 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 13 238 IPR000795 GO:0003924|GO:0005525
Mupr12751g00003 517 CDD EF1_alpha_II 238 328 - -
Mupr12751g00003 517 Pfam Elongation factor Tu C-terminal domain 330 437 IPR004160 -
Mupr12751g00003 517 SUPERFAMILY Translation proteins 239 329 IPR009000 -
Mupr12751g00003 517 Hamap Elongation factor Tu [tuf]. 10 440 IPR004539 GO:0003746|GO:0005525|GO:0006414
Mupr12751g00003 517 PRINTS GTP-binding elongation factor signature 112 123 IPR000795 GO:0003924|GO:0005525
Mupr12751g00003 517 PRINTS GTP-binding elongation factor signature 76 84 IPR000795 GO:0003924|GO:0005525
Mupr12751g00003 517 PRINTS GTP-binding elongation factor signature 156 165 IPR000795 GO:0003924|GO:0005525
Mupr12751g00003 517 PRINTS GTP-binding elongation factor signature 96 106 IPR000795 GO:0003924|GO:0005525
Mupr12751g00003 517 PRINTS GTP-binding elongation factor signature 17 30 IPR000795 GO:0003924|GO:0005525
Mupr12751g00003 517 FunFam Elongation factor 1-alpha 237 324 - -
Mupr12751g00003 517 CDD EF1_alpha 17 235 - -
Mupr12751g00003 517 CDD EF1_alpha_III 331 434 - -
Mupr12751g00003 517 FunFam Elongation factor 1-alpha 331 438 - -
Mupr12751g00003 517 FunFam Elongation factor 1-alpha 9 234 - -
Mupr12751g00003 517 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 334 437 IPR009001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12751g00003 Mupr-Chr12751 12068 14776 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12751g00003 9 448 Eukaryotic Initiation Factors Gene Family AT5G60390 96.136 0.0 881
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12751g00003 K03231 - gmx:100807572 893.264