LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr12747g00001	ATGAAGCTAAACACTGTTGTCATACCTCACAGACCATGCGACAATCACTGTCATGGTCCCAAATCTCGAGCTCAAGCACGGGAGAGATTTTCCAAAAGGGTTTGCTTGTTTTTATGCCTTTTCAGAACCTCAGAACCGAAGATCCCAGTAGAAAATTATTTTCGTTTCATGGAAGATGTCAAAGTGGTTACTTGGCTCATTTCTCTCTTTCTGTGTTATTGGGTGCTTCTTGTTGAGAGCACTGATAGCCTTCTCTCTCCAAAGGGTGTCAACTATGAAGTGGCTGCTTTGATGTCCATGAAGAGTAAGATGAATGATGGCTTGCATGTCATGGATGGTTGGGATATTAATTCGGTTGACCCTTGTACTTGGTACATGGTTGGTTGCTCTGCCGAGGGTTATGTCATTTCCCTGGAAATGGCCAGTGCGGGTTTGTCTGGAACGATTTCTTCAGGAATTGGAAATTTGAGCCACCTCCATACATTGTTATTGCAGAACAATCAGTTATCTGGACCTATCCCGACTGAGATTGGCAAGCTGTTAGAGCTTCAAACCCTTGACCTTTCTGGTAACCAGCTTGATGGGGCAATTCCTAATTCTTTGGGCTTTTTGACTCATCTTAGTTACTTGCGGCTCAGCAAAAATAAACTATCTGGACAGATCCCTCAGCTTGTTGCTAATCTCACAGGCCTTTCATTCTTGGACTTGTCATTCAATAATCTCAGTGGTCCCACTCCAAAAATTTTAGCAAAAGGTTATAGGAAACAACTTCCTCTGCACCTCTTCCTCACAAATTTGTATGGGCTTCTCAAAACCAATGCAGGGTCATCTCAGACGACTGGTAGTCATCACCAAAGGGTGCTTGCTGTTGTTATTGGCTTTAGTTGCACATTTGTAATTTCAGTGGTGCTTCTCATCTTTTGGTTGCGTTGGTACAGATCACACATTCTCTACACATCTTATGTGGAGCAAGACTGTGAATTTGATATTGGCCATTTGAAGAGGTTCTCCTTTCGTGAATTGCAAATTGCTACTGGAAGTTTCAATTCAAAAAATATCCTAGGACAAGGTGGTTTTGGTGTTGTCTACAAAGGATGCCTTGCAAACAAAATGTTGGTGGCAGTAAAGAGACTGAAAGATCCCAATTACACCGGAGAAGTGCAGTTTCAAACGGAAGTTGAGATGATTGGCTTGGCTGTGCATCGAAACCTCTTGCGTCTTTATGGATTTTGTATGACTCCAGATGAAAGGTTGCTTGTTTATCCTTACATGCCCAATGGCAGTGTTGCTGATCGCTTGAGAGAGACTTGCCGTGAAAAGCCATCATTGGACTGGAACAGGCGAATGCATGTTGCTCTTGGAGCAGCGCGCGGGCTTCTATATTTGCATGAACAATGCAATCCAAAAATAATCCACAGGGATGTTAAGGCTGCAAACATTTTGTTAGATGAAAGTTTTGAAGCCGTGGTGGGGGATTTTGGTCTTGCTAAGCTCTTAGATCAAAGGGATTCACATGTAACTACTGCAGTGCGGGGTACTGTAGGGCACATTGCACCGGAGTATCTCTCAACTGGACAGTCTTCTGAAAAAACAGATGTTTTTGGTTTTGGCATATTACTTTTGGAGCTCATAACAGGACACAAGGCACTAGATGCTGGAAATGGTCAGATCCAAAAGGGAATGATTCTTGATTGGGTAAGAACCTTATATGAGGAGAAGCGACTGGAAGTGTTAGTTGACAGGGATCTGAGGGGATGTTTTGATCCAGAGGAGTTAGAGAAAGCAGTGGAGTTGTCTTTACAGTGTACTCAGTCGCTTCCCACTTTGAGGCCAAAGATGTCAGAAGTTTTGAAGATTCTAGAAGGTCTGGTAGGGCAGTCAGTGAGGCCAGAGGAGTCACAAGGAGGGGCTAACCTATATGATGAAAGAGCTTGCAGTTTCTCACAAAATTATAGTGATGTTCATGAAGAGCCTTCTTTTATCATTGAAGCCATTGAGCTTTCTGGACCTCGGTGA	2016	0.4325	MKLNTVVIPHRPCDNHCHGPKSRAQARERFSKRVCLFLCLFRTSEPKIPVENYFRFMEDVKVVTWLISLFLCYWVLLVESTDSLLSPKGVNYEVAALMSMKSKMNDGLHVMDGWDINSVDPCTWYMVGCSAEGYVISLEMASAGLSGTISSGIGNLSHLHTLLLQNNQLSGPIPTEIGKLLELQTLDLSGNQLDGAIPNSLGFLTHLSYLRLSKNKLSGQIPQLVANLTGLSFLDLSFNNLSGPTPKILAKGYRKQLPLHLFLTNLYGLLKTNAGSSQTTGSHHQRVLAVVIGFSCTFVISVVLLIFWLRWYRSHILYTSYVEQDCEFDIGHLKRFSFRELQIATGSFNSKNILGQGGFGVVYKGCLANKMLVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNLLRLYGFCMTPDERLLVYPYMPNGSVADRLRETCREKPSLDWNRRMHVALGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKALDAGNGQIQKGMILDWVRTLYEEKRLEVLVDRDLRGCFDPEELEKAVELSLQCTQSLPTLRPKMSEVLKILEGLVGQSVRPEESQGGANLYDERACSFSQNYSDVHEEPSFIIEAIELSGPR	671

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr12747g00001	671	SMART	serkin_6	348	619	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr12747g00001	671	FunFam	Somatic embryogenesis receptor-like kinase 1	424	638	-	-
	Mupr12747g00001	671	FunFam	Somatic embryogenesis receptor kinase 1	318	423	-	-
	Mupr12747g00001	671	SUPERFAMILY	Protein kinase-like (PK-like)	332	630	IPR011009	-
	Mupr12747g00001	671	SUPERFAMILY	L domain-like	92	269	-	-
	Mupr12747g00001	671	Pfam	Leucine rich repeat	182	241	IPR001611	GO:0005515
	Mupr12747g00001	671	Gene3D	Phosphorylase Kinase; domain 1	318	423	-	-
	Mupr12747g00001	671	ProSitePatterns	Protein kinases ATP-binding region signature.	354	376	IPR017441	GO:0005524
	Mupr12747g00001	671	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	470	482	IPR008271	GO:0004672\|GO:0006468
	Mupr12747g00001	671	Gene3D	Ribonuclease Inhibitor	90	257	IPR032675	-
	Mupr12747g00001	671	ProSiteProfiles	Protein kinase domain profile.	348	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr12747g00001	671	PANTHER	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	67	619	-	-
	Mupr12747g00001	671	Pfam	Leucine rich repeat N-terminal domain	91	130	IPR013210	-
	Mupr12747g00001	671	PRINTS	Leucine-rich repeat signature	183	196	-	-
	Mupr12747g00001	671	PRINTS	Leucine-rich repeat signature	228	241	-	-
	Mupr12747g00001	671	FunFam	LRR receptor-like serine/threonine-protein kinase ERECTA	90	250	-	-
	Mupr12747g00001	671	Gene3D	Transferase(Phosphotransferase) domain 1	424	629	-	-
	Mupr12747g00001	671	Pfam	Protein kinase domain	349	618	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr12747g00001	Mupr-Chr12747	480	5473	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr12747g00001	98	671	Receptor kinase-like Gene Family	AT5G45780	69.983	0.0	801

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-II	Mupr12747g00001		Pkinase	3.7e-44	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr12747g00001	-		-	ccaj:109812711	1153.27