Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12740g00004 ATGGCTGGTAGGTTGCCTGGGGTTGGGTTGCTTACAAGGAAGAGAACAGAACAACACCATAGACATGAAAACAGACACTCCAACAATAATTACCTTAGGGAATCATTCATTCCACTCACTCTCTTAGATGACACTGCTCTCAAGGCCAGGCAACGCCTCCACAACAAGCTTGCTAACTTCTTTTCCTCCTACAGGTTAAGTGAGAATCCAAAAAAAGAAGGAAAAGTGAGGCAAAGCAGTGAGCATAAGAAGGATGGAGGAATAGGTCGGAAGTTACTAGAGAGTTCATGGTTATTGCGTGGCAACAAGTTAAAGAAAGAGAGAAAAGTGTGTTCTGTTTGCCTAGAAGATTTTGGGCAAGAGCAACAGGTTATGAACCTTTCTTGTTCTCACAAGTATCATTCAGCATGCCTTCTTCCTTGGCTTGCGGCACATCCCCATTGTCCCTATTGTCGAACCCCAATTCACCTCTGA 474 0.4409 MAGRLPGVGLLTRKRTEQHHRHENRHSNNNYLRESFIPLTLLDDTALKARQRLHNKLANFFSSYRLSENPKKEGKVRQSSEHKKDGGIGRKLLESSWLLRGNKLKKERKVCSVCLEDFGQEQQVMNLSCSHKYHSACLLPWLAAHPHCPYCRTPIHL 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12740g00004 157 PANTHER SI:CH211-59O9.10 107 156 - -
Mupr12740g00004 157 CDD RING-H2_PA-TM-RING 110 152 - -
Mupr12740g00004 157 MobiDBLite consensus disorder prediction 1 26 - -
Mupr12740g00004 157 SUPERFAMILY RING/U-box 110 156 - -
Mupr12740g00004 157 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 156 IPR013083 -
Mupr12740g00004 157 SMART ring_2 111 151 IPR001841 -
Mupr12740g00004 157 Pfam Ring finger domain 110 152 IPR001841 -
Mupr12740g00004 157 FunFam Uncharacterized protein 62 157 - -
Mupr12740g00004 157 ProSiteProfiles Zinc finger RING-type profile. 111 152 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12740g00004 103 155 C3H Transcription Factor Family AT1G49850 45.283 7.31e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12740g00004 - - gmx:100527548 259.61