Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12733g00001 ATGGATCGAGAATGGGGATCGAAGCCAGGGAGCGGAGGGGCGGCGACGGCGCAGAACGAAGCCATCGACCGGCGAGAGCGTCTCCGGCGACTGGCTCTGGAGACGATAGACCTTGCGAAGGACCCTTACTTCATGCGCAACCACCTTGGGAGCTACGAATGCAAACTGTGTCTCACTCTCCACAACAACGAGGGCAACTACTTGGCCCACACTCAGGGCAAGCGCCACCAAACCAACTTGGCTAAACGTGCTGCTCGCGAGGCCAAGGACGCCCCTGCCCAGCCCCAACCCCACAAGCGCAAAATTGGTCGCCCTGGCTACCGTGTCACTAAGCAGTATGATCCTGAGACCAAGCAAAGATCTCTCCTATTCCAGATTGAATATCCTGAGATTGAAGACCTCACCAAGCCCAGACACCGCTTTATGTCCTCATACGAACAGAGGGTGCAACCCTTTGATAAAAGATATCAGTATCTATTGTTTGCAGCTGAACCCTATGAAATTGTTGCTTTCAAGGTGCCTAGCACAGAGATTGATAAGTCCACTCCTAAGTTTTTCTCGCACTGGGATCCAGACTCGAAGATGTTTACGTTGCAATTGTATTTTAAAACCAAGCCACCAGAGACGAACAAACCACAGCCTGCCTCTACAGCCAATGGCACAGCAGCATCTGGTGTTCCACCAAGGCCTTTGCCCCCACCACCCCAAGCTCCACTACCACCACCTCCACCTCCTCCACAAGGGCTACCTCCTGGTGCACCTATGGCAAATCCTCCTCGAGCTCCTCCACCTCCAATGCCGGGGTCAATGCCACCTCCTCCTATGGCAGCTAATGGTCCTAGACCTGCTCCTTCTGGTGGAATGCCATCTGTCCCACCCCCACCCCCTGTTGCCAGTGGGACAACAGGTTTTAACATGGGTGCTAGACCTCCATCAATGCCACCTCCACAAGGTTTTCCTGCCCAACCAATGCAGAACCAGGGTGTCCGTCTTCCTCCACCACCCCCTAACATGGGACATATCAATATTTTTGGTATTTTGCATTCATGCCTTTTGAGTATTGACAGTGTCCACAAGTTTTTGTCTCAATCGCATGCTATGCTTGAAGAGGGAGAAAAGACTATTCGGAGCCAAGAGTACAAAGGCTATATGCATGATTCATGTGTTGATACATTGATTGTTGAAAATAGAGTATACAGCCAGAAGGGAATTATAGTTAGGAAGGCCGGATTGACAAGGGACATTGATGGGGCTGTTTTAGTTTTTACGATAGTAGATTAG 1281 0.5098 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRKIGRPGYRVTKQYDPETKQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIVAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPETNKPQPASTANGTAASGVPPRPLPPPPQAPLPPPPPPPQGLPPGAPMANPPRAPPPPMPGSMPPPPMAANGPRPAPSGGMPSVPPPPPVASGTTGFNMGARPPSMPPPQGFPAQPMQNQGVRLPPPPPNMGHINIFGILHSCLLSIDSVHKFLSQSHAMLEEGEKTIRSQEYKGYMHDSCVDTLIVENRVYSQKGIIVRKAGLTRDIDGAVLVFTIVD 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12733g00001 426 SMART CactinC_cactus_3 86 208 - -
Mupr12733g00001 426 MobiDBLite consensus disorder prediction 205 223 - -
Mupr12733g00001 426 Pfam Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) 102 196 IPR031781 -
Mupr12733g00001 426 MobiDBLite consensus disorder prediction 226 299 - -
Mupr12733g00001 426 SMART ZnF_U1_5 49 83 IPR003604 GO:0003676|GO:0008270
Mupr12733g00001 426 ProSiteProfiles Zinc finger matrin-type profile. 52 82 IPR000690 GO:0003676|GO:0005634|GO:0008270
Mupr12733g00001 426 MobiDBLite consensus disorder prediction 1 21 - -
Mupr12733g00001 426 MobiDBLite consensus disorder prediction 205 335 - -
Mupr12733g00001 426 FunFam Splicing factor 3a subunit 2 86 210 - -
Mupr12733g00001 426 MobiDBLite consensus disorder prediction 309 335 - -
Mupr12733g00001 426 PANTHER SPLICING FACTOR 3A SUBUNIT 2 1 338 - -
Mupr12733g00001 426 SUPERFAMILY beta-beta-alpha zinc fingers 48 82 IPR036236 -
Mupr12733g00001 426 Pfam Zinc-finger of C2H2 type 52 76 - -
Mupr12733g00001 426 Gene3D - 84 210 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12733g00001 1 220 C2H2 Transcription Factor Family AT2G32600 86.842 1.97e-134 385