Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12729g00005 ATGTGCGAAGCCCTGAAGACGCAGTACAAGGTGAGCGAGGAGATAGGTAGGGGTAGATTCGGCACAATATTCCGGTGTTTAGACCCCCACACCAACGAGTCCTTGGCCTGTAAGCTCATAGACAAGTCCCTCCTGGCCGACCCCACAGATCGCCAGTGTCTTCAAAACGAACCCAAATTCATGTCCCTCTTATCACCCCATCCAAACATCCTTCAAATCATCGACTTCTTTGAGGACGATCAATTTCTATCCATCGTCATGGACCTCTGCCAGCCCCACACCCTCTTCGATCGCATGCTTCATTGCCCCTTCCCCGAGCCTCAGGCCGCTTCTCTCATCAACACCCTTCTCCAAGCAGTCGCCCACTGCCACCGCTGCGGCGTCGCCCACCGCGACATCAAGCCCGATAACATTCTCTTCGATTCCGCCGGTAATCTCAAGCTCGCCGACTTCGGTTCCGCCGAGTGGTTCGGCGATGGCAGTACCATGACCGGTGTTGTCGGTACGCCCTACTATGTGGCTCCCGAGGTTCTCATGGGGAGGGACTACGACGAGAAAGTTGATGTCTGGAGTTGTGGCGTCATTTTGTACATAATGTTGGCTGGGATTCCCCCTTTTTATGGAGACTCTGCCGCTGAGATCTTTGAGGCTGTTGTTAGGGCTAATCTTAGGTTCCCTTCTAGAATCTTCCGAACTGTGTCCCCCGCCGCCAAGGATCTTTTAAGAAAAATGTTATGTAGGGATCCTTCTAGGAGGTTCTCTGCCGAACAAGCCTTGAGACACCCTTGGATCTTGAGTGCAGTTGATCTGACTTGA 816 0.5294 MCEALKTQYKVSEEIGRGRFGTIFRCLDPHTNESLACKLIDKSLLADPTDRQCLQNEPKFMSLLSPHPNILQIIDFFEDDQFLSIVMDLCQPHTLFDRMLHCPFPEPQAASLINTLLQAVAHCHRCGVAHRDIKPDNILFDSAGNLKLADFGSAEWFGDGSTMTGVVGTPYYVAPEVLMGRDYDEKVDVWSCGVILYIMLAGIPPFYGDSAAEIFEAVVRANLRFPSRIFRTVSPAAKDLLRKMLCRDPSRRFSAEQALRHPWILSAVDLT 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12729g00005 271 SMART serkin_6 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12729g00005 271 CDD STKc_CAMK 8 263 - -
Mupr12729g00005 271 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Mupr12729g00005 271 SUPERFAMILY Protein kinase-like (PK-like) 6 267 IPR011009 -
Mupr12729g00005 271 Pfam Protein kinase domain 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12729g00005 271 ProSiteProfiles Protein kinase domain profile. 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr12729g00005 271 FunFam Phosphoenolpyruvate carboxylase kinase 2 1 271 - -
Mupr12729g00005 271 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 264 - -
Mupr12729g00005 271 FunFam Phosphoenolpyruvate carboxylase kinase 1 1 91 - -
Mupr12729g00005 271 Gene3D Transferase(Phosphotransferase) domain 1 93 269 - -
Mupr12729g00005 271 PIRSF ILK 2 260 - -
Mupr12729g00005 271 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Mupr12729g00005 271 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12729g00005 Mupr-Chr12729 45517 46665 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12729g00005 2 263 EF-hand Containing Proteins AT2G38910 43.985 3.67e-75 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mupr12729g00005 Pkinase 7.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12729g00005 - K08794 gmx:548089 473.396