Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12728g00001 ATGGTAAGAACCCCGAGCTATGACAAAAATGGACTGAAGAAAGGAGCATGGAGCCAAGAGGAAGACAAGAAGTTAATTGATTATGTTACTAGATATGGCCACTGGAATTGGCGATTACTCCCCAAGTTCGCAGTTTCGGTTTTCTGCCAATGTGTAGGGATTATTCCATGTTTATACATATGCACAGATTACATACAGTGTGTTGAGTTTTATATCCATTGTAATTGGTTTTACTTGTTGTTGTCAGGTCTTGCCAGATGTGGAAAGAGTTGCAGACTTAGATGGCTGAATTACCTAAGGCCAAACCTTAAAAGAGGGAATTACACTCAACAAGAGGAGGAAACTATTATCAACCTGCACCGACATCTGGGTAACAGATGGTCTGCAATTGCTGCTCGGATGCCAGGAAGAACAGATAACGAAATCAAAAACCATTGGCACACCAACCTCAAGAAGCGGTCTCAGCAGGACTCAGTTACAGAAGCTCAGGTTTCCATGTCAGAGGAACAATCCCCAACTGAACCAACAGCAAAGGATTCTTTCCAACAAAGCCTTCAGAGCACGCAAGATTGTTCCTCGTTTTCCCAGCATTCATTATCCTCCTCCACGAGCACAGAGTGTACCACTGTCACTAGCAACGAAAATCTGGTTAAGGAAGATGAATTTACCTTTTGGGATGCAGACACGGATCTTATGAGTAGAAACTTCTGGTTGGAACCGTACATGCTTGATATTTCCTACGTCCCTAGTACAGAACCCGAGTACTTTAGCCCTGTCTTTGATGCAGAACTTTGGGGTCATGATGATAACTGA 813 0.4317 MVRTPSYDKNGLKKGAWSQEEDKKLIDYVTRYGHWNWRLLPKFAVSVFCQCVGIIPCLYICTDYIQCVEFYIHCNWFYLLLSGLARCGKSCRLRWLNYLRPNLKRGNYTQQEEETIINLHRHLGNRWSAIAARMPGRTDNEIKNHWHTNLKKRSQQDSVTEAQVSMSEEQSPTEPTAKDSFQQSLQSTQDCSSFSQHSLSSSTSTECTTVTSNENLVKEDEFTFWDADTDLMSRNFWLEPYMLDISYVPSTEPEYFSPVFDAELWGHDDN 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12728g00001 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 39 IPR017930 -
Mupr12728g00001 270 FunFam Transcription factor MYB14 107 179 - -
Mupr12728g00001 270 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 214 - -
Mupr12728g00001 270 SUPERFAMILY Homeodomain-like 7 43 IPR009057 -
Mupr12728g00001 270 MobiDBLite consensus disorder prediction 155 185 - -
Mupr12728g00001 270 MobiDBLite consensus disorder prediction 152 185 - -
Mupr12728g00001 270 CDD SANT 107 150 IPR001005 -
Mupr12728g00001 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 154 IPR017930 -
Mupr12728g00001 270 SMART sant 13 101 IPR001005 -
Mupr12728g00001 270 SMART sant 104 152 IPR001005 -
Mupr12728g00001 270 ProSiteProfiles Myb-like domain profile. 100 150 IPR001005 -
Mupr12728g00001 270 Gene3D - 6 104 - -
Mupr12728g00001 270 CDD SANT 16 43 IPR001005 -
Mupr12728g00001 270 ProSiteProfiles Myb-like domain profile. 9 99 IPR001005 -
Mupr12728g00001 270 SUPERFAMILY Homeodomain-like 86 159 IPR009057 -
Mupr12728g00001 270 Gene3D - 107 181 - -
Mupr12728g00001 270 Pfam Myb-like DNA-binding domain 105 150 IPR001005 -
Mupr12728g00001 270 Pfam Myb-like DNA-binding domain 14 40 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12728g00001 Mupr-Chr12728 4202 5975 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12728g00001 3 263 MYB Transcription Factor Family AT1G79180 40.226 3.15e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr12728g00001 Myb_DNA-binding 1.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12728g00001 K09422 - gmx:100778518 354.755