Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12722g00002 ATGGAAATGAATAATCTACACTTGTCTACCTCTTCATGCTATATTGAATTGAATCAATGGCTCTGTTACACCGAGCCATGCGCACGACACATTCTACTATGCCCTCTCACGCTCAGCTGTTGCAACATGCTTGTGCCCGCATGCTGCCTCTTCTCACTATTTGGATTTGTGGCATGTAATTTTTCATCTTCTTTATGGTTCCCTCCCTCTCTTGACCACTCTTTCTCATGCATTGCCCTTTTCTTTCTTTTTCTATGTTTCTGTTTTGCAGTTTCAGTCACACTCCGTTATGGGTATTATGGGGATTCTACTATCCTGCTTGGCCCTGCCTCGTCCCGTTTGATGAAGGCTAGCTCTCTTTTTGTCAAGCAGCTTCGAGTATCAAACAAGGACAATAATCAAGTTATTCTTCACTCCTTCAACGAGAAGCCTAAGTTAAGCTCCCAAACTACTTGGACAGCGTCGAATTTCTTCCTTGTTGAAGCACATAAAAGCAAGGGAATTTCTTTGTGGTTGAATAAGGGCTCCACCATCCATATGAGGTGGGAAGCACACACTAGTAGTAGTTTGAATCAGCTACATGGGATGGTGATCAAAGGGGAAAAGAAGTTTGGACTACTACAGCCTAAACAAACGAACTTCTCCATTGCAATTGCTGTTCGAGAGACTGTTAATGGTAAAGAAGCTGAATACATGATTGAGGAAGATGATAGATACGACATTGGGGTTCTAAACATGAATGCCAGGAACATAATCTTGACTATGGAAGTTAATGTTTCGGCAAAGGTATATGATACCACCAAAGCCAAGAAGATGTGCTCAATTGCAAATGGATCTTGTAGGCTCAGTTTTGTCTTCCCAAATACTCATTATGTTATTCTTACGGCAACCAACAACGGAGATGGGGGATCGTATGTTGAAATTACTTTAGTGGCTCGTGTGTTGACCTACATATTACTTTTAGGATTTTTTATGATTGTTGTTTATCTGATTCTGAAGTTCCTTGGAGTCTATGATGGTAGTGATCAGAATAGTCATGTGACAGTCAACGTCACATACAGAACAAGTAATGTGGTTGCAACCCAAACCGAAACTGAGCCCTTGATGCCAGCGGAGACAAATCGATTTTCATACGGAACAAATGCAGAAGATGATAAAGAAGATTCTGGAGCATCCAGTAGCTCTTCAGAGGAGTTATATGATGAAAAATTATGTTGCATTTGTTATGATGAACAACGCAATAGCTTCTTTGTTCCTTGTGGCCATTGTGCCACTTGCTACGAGTGTGCACAGAGGATTGTGGATGGGGAGAGCAAAGTGTGTCCTATATGCCGAAGGCTTATTCACAAAGTACGAAGATTATATCATAATTAG 1374 0.4112 MEMNNLHLSTSSCYIELNQWLCYTEPCARHILLCPLTLSCCNMLVPACCLFSLFGFVACNFSSSLWFPPSLDHSFSCIALFFLFLCFCFAVSVTLRYGYYGDSTILLGPASSRLMKASSLFVKQLRVSNKDNNQVILHSFNEKPKLSSQTTWTASNFFLVEAHKSKGISLWLNKGSTIHMRWEAHTSSSLNQLHGMVIKGEKKFGLLQPKQTNFSIAIAVRETVNGKEAEYMIEEDDRYDIGVLNMNARNIILTMEVNVSAKVYDTTKAKKMCSIANGSCRLSFVFPNTHYVILTATNNGDGGSYVEITLVARVLTYILLLGFFMIVVYLILKFLGVYDGSDQNSHVTVNVTYRTSNVVATQTETEPLMPAETNRFSYGTNAEDDKEDSGASSSSSEELYDEKLCCICYDEQRNSFFVPCGHCATCYECAQRIVDGESKVCPICRRLIHKVRRLYHN 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12722g00002 457 Pfam Zinc finger, C3HC4 type (RING finger) 402 451 - -
Mupr12722g00002 457 PANTHER OS05G0521000 PROTEIN 79 455 - -
Mupr12722g00002 457 Pfam Domain of unknown function (DUF4793) 229 330 IPR032010 -
Mupr12722g00002 457 SMART ring_2 405 444 IPR001841 -
Mupr12722g00002 457 Pfam Domain of unknown function (DUF4792) 136 204 IPR032008 -
Mupr12722g00002 457 SUPERFAMILY RING/U-box 396 451 - -
Mupr12722g00002 457 ProSiteProfiles Zinc finger RING-type profile. 405 445 IPR001841 -
Mupr12722g00002 457 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 379 456 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12722g00002 Mupr-Chr12722 8447 11039 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12722g00002 388 455 C3H Transcription Factor Family AT1G62370 33.824 5.75e-06 45.4