Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1270g00004 ATGGTTGCTTTGAATGCTGTGCTGGGAACTGCCAATGTGGCATTCTTTTATGCCATTTTGATATGGCTTTTGGTGGATAGTTTGAGACAAAGCAAGCGTGGCCATGTTCGTGCGCTACATTTCAAACGAGGAACAATGGTTTTCGCTACAATCACTGTTCTCTCCAGTGCTGTTATTTCTTTTATGAACATTACTCTTGGTTTTTACCAATTCAGCTCTGGGAGAATCATAGGATATAACTTCCTTTCCTTGGCCTTAACATGGGTTTTGGCCACTATGGTTTCGTTCTATTCAATGAGGACCATAGTGAGGGAGAAAAGAAGGTTCCCCCTTGTTCTGGTCCTATGGTGGGTGTTTGCTTGTGTCATAGATGCACTCTTAGTGTCTATAAAGCTGGTAAAAAATTTGGAATCAATGAGTTTGTGGTTTCTCTTGTCAGAGGATAATATAGTTGATGTGGTTTCCTTGCCTTTGTTGGTGCTTCTGTGTTTCAATGTGTGTGCAAGGGAGCACAGTGATATGGAAGAACGGTTACTTCAGGAAGAGTTGAAATCTTCCATTGAAGGAGAAGATGAAGAGGCCTTCACAAATTCAAGCATGTGGAGCAAGCTCGCATTCCGATGGTTGAACCCCACATTTAAAACGGGTCGGATTAGAAAACTTGAACTTGCTCATATTCCTCCTGTTCCTCATTCTGAAACTGCAGAAAGTGCTTCTTTCTTATTGGAAGAATCACTTCGTAAACAGAAACTTAAAGGGGGTTCTTTGACAAAAGCCATTGCCCATTCTATATGGAAGTCCCTGGCCTTAAATGCAGTTTTAGCTGGTATATATTTTATAATTTATTCAGTATCACTATTCACTACTACTGTTCCTCTTTGGTTTTTGTGTACTTTTTATTCAATTTTAGTCATTCGTGTATTGGTTACTAATTTATATGTTTTGTTTACACATGTAGGTGTTAACACAGGTGCCTCCTATATAGGCCCCTTGTTGATCACAAATTTTGTGAATTTTTTATTGGGGAATAGTGGTGATTCAAGTATCCAATATGGTTTGGTTCTTGCATTTATTTTCTTCCTCGCGAAGACGGTGGAGTCACTGAGTCAAAGACAATGGTACTTTGGCGCTCAAAGAATAGGAATCCGGGTGCGTGCAGCTCTTATATCTCTAATTTATAGCAAGTGCCTATTGATGAAGTGTGCTGGACCAACACAAGGTAAAACCATCAATTTGATCAATGTGGATGTTGAAAGAATTGGAGACTTCTGCTGGTACATTCATGGAGTTTGGTTGCTTCCAGTTCAGATCATTTTGGCCTTGGTAATCTTATACATAAATCTGGGTTATACCCCTTCTGTTGCTGCATTTGGTGTCACCATTTTGGTCATGATGTGTAACACACCTTTGGCCAGTAAGCAAGAAGGTTTGCACTCCAAGATCATGGAAGCTAAGGATTCAAGAATCAAGGTGACATCGGAGACTATGAAGAACATAAGAATTTTAAAATTGCATTCATGGGAAACCTCGTTTTTGCAGAAACTCCTCCAACTTAGGGAAACTGAGAGGAGGTGGCTGCAGAAATACCTCTATACATGCTCAGCAGTAGCCACTCTATTCTGGACATCTCCAACTTTAGTTTCTGTTGTCACTTTTGGTGCTTGTATACTGGTGAAAACAGAACTAACTGCAGCTACGGTCCTCTCGGCTTTGGCAACTTTTCGTATTTTGCAAGAACCAATCTACAACTTACCAGAGCTTATCTCCATGATAATTCAAACAAAAGTATCTGTCGATCGAATCCAGGAGTTTATTAAGGAAGACGATCAAAACCAATTCACAAATAGGCATGCTCCAAAAACTTCGGCAGTTGCTATTGAAATTAAGCTAGGCGAATATGCATGGGAAACAAATGATCAAACCCTCAAGAAACCAACAATACAAATCACAGAGAAGTTAGTGATAAGGAAAGGTCAGAAGGTAGCAGTTTGTGGGTCAGTGGGGTCTGGCAAATCAAGCTTGTTTTGCTGTATGCTTGGTGAGATTCCTTTAGTCTCTGGGGCAGTAACCGAAGTCTATGGGACTAGAAGTTATGTACCCCAAAGTCCATGGATTCAGTCGGGAACTGTAAGAGAAAATATATTGTTTGGCAAGCAAATGAAGAAGGACTTTTATGAAGATGTTTTGGATGGATGTGCTTTGCACCAGGACATCAAGATGTGGGGTGATGGAGATTTGTACCTGGTGGAGGAGAGGGGCATAAACTTAAGTGGTGGGCAGAAACAGCGGATTCAATTGGCAAGGGCTGTTTACAATGACTCAGATATTTATTTCCTTGATGATCCTTTTAGTGCTGTTGATGCTCATACTGGAACTCATTTGTTCAAGAAATGTCTCATGAAACTTCTATACGATAAAACGGTTGTTTATGCTACGCATCAACTGGAATTCTTGGAAGCTGCAGACCTCATTTTGGTAATGAAAGATGGAAAAATAGTGGAGTCAGGAAGGTATAAAGACCTCATAGCATGTCCCAACTGTGAACTTGTTCAACAAATGGCTGCTCACCAAGAAACAGTAAATCAAATAAATCCATGCCACGAAGATGATTCTGCTAGCTGCAGACCCTGCCAAAAGAATCAAATTGAAGTTGCTGAAGAAAATATTCAAGAGATAATCGAAAATTGGAAGAGAAACAAAGAAGAGGAAGCAGAGACTGGTCGAGTGAAATGGAGTGTTTACTCAACCTTTGTCACATCTGCCTATAAAGGAGCACTTGTTCCGGTTATTCTTCTCTGTCAAATTCTCTTTCAAGTTATGCAGATGGGAAGCAATTATTGGATTTCTTGGGCCACAGAGGAAAGGGGCAGGGTCAACAACAAACAGCTTATGGGAACATTTGTTCTTCTATCTTGTGGTGGCACCATCTTCATATTGGGAAGGACTGTTTTAATGGCAGCTATTGCCGTGGAAACTGCTCAACGCCTTTTTCATGGAATGATCACATCAGTTTTCAGGGCACCTGTTTCATTTTTTGACACCACACCTTCAAGCCGAATTATGAGTAGGTCATCAACGGATCAAAGTACAGTGGACACAGACATACCATACAGATTAGCTGGACTAGTATTTGCACTTATCCAGTTATTGAGTATCATTGTGCTAATGTCCCAAGTTGCCTGGCAAGTCATTCTCTTCTTTTTTGTGGCGCTTGCTATTTCTATTTGGTATCAGGCTTACTACATCACAACAGCCAGGGAATTAGCCAGGATGGTAGGGATTCGAAAGGCGCCAATCTTGCATCACTTCTCAGAATCAATTGCTGGGGTTGCCACAATCCGCTGTTTCAATCAAGAGCAACTATTCTTGACCAAATCTAAGGCTCTAATTGATGATTATTCTCGGGTAGCCTTTTACAATTTTGGCACCATGGAATGGTTGTCTGTCCGAATCAATTTCCTCTTCAATTTGGTCTTCTTTTTTGTTCTCGTCATCTTGGTTACTCTGCCAAGGTCTACCATTGATCCAAGCTTGGCAGGTCTGGTAGCTACTTATGGTTTGAACTTGAATGTCCTTCAGGCTTGGGTGATATGGAATCTTTGCAATGTAGAGAACAAAATGATATCAGTTGAGAGAATATTGCAGTTCTCTAGCATACCAAGTGAAGCACCATTAGTTATTCAAGATTGCAGGCCAGAACTAGAGTGGCCAAAGGAGGGAAAAGTTGAACTTCATAACCTTCATATACAGTATGATCCTGCTACTCCTATGGTCCTCAAAGGTGTCACTTGTGTCTTCCCAGGACAAAAGAAAATTGGTATAGTAGGCAGGACAGGGAGTGGAAAATCTACTCTGGTGCAAGCTCTCTTTCGAGTGGTGGAGCCTTCGAAAGGATGTATACTTATCGATGGTGTAGATATTTCCAAGATTGGTCTGCAAGATTTAAGATCTAAGCTCGGGATAATTCCTCAGGATCCAACCTTGTTTCTAGGTACAGTGAGGACTAACTTGGATCCTCTGGAACAACATGAAGATCAAGAACTTTGGGAGGTTCTCAGTAAGTGCCATCTTGCTGAAATAGTAAGGCAGGATCCAAGACTTCTTGATGCACCAGTGGCGGAGAATGGAGAGAATTGGAGTGTCGGACAAAGGCAACTTGTTTGTCTTGCTAGGCTACTACTGAAGAAAAGACGAATTTTGGTCCTAGATGAGGCCACTGCTTCCATTGACATTTCCACGGACAATTTAATTCAGAAGACAATTAGGGAAGAAACAAGTGGATGCACGGTCATTACAGTAGCACATAGAATTCCTACAGTTATTGATAATGATTTGGTTTTGGTCCTTGATGAAGGGACAATTGTGGAGTATGACAAACCGGCTCAATTGCTGCAGAATAATTATTCTTCCTTCTCAAAGTTAGTCTCAGAATTTTTAAGGAGATCATCCCAAAGTAACTTCCAAAAAAGATAA 4473 0.4085 MVALNAVLGTANVAFFYAILIWLLVDSLRQSKRGHVRALHFKRGTMVFATITVLSSAVISFMNITLGFYQFSSGRIIGYNFLSLALTWVLATMVSFYSMRTIVREKRRFPLVLVLWWVFACVIDALLVSIKLVKNLESMSLWFLLSEDNIVDVVSLPLLVLLCFNVCAREHSDMEERLLQEELKSSIEGEDEEAFTNSSMWSKLAFRWLNPTFKTGRIRKLELAHIPPVPHSETAESASFLLEESLRKQKLKGGSLTKAIAHSIWKSLALNAVLAGIYFIIYSVSLFTTTVPLWFLCTFYSILVIRVLVTNLYVLFTHVGVNTGASYIGPLLITNFVNFLLGNSGDSSIQYGLVLAFIFFLAKTVESLSQRQWYFGAQRIGIRVRAALISLIYSKCLLMKCAGPTQGKTINLINVDVERIGDFCWYIHGVWLLPVQIILALVILYINLGYTPSVAAFGVTILVMMCNTPLASKQEGLHSKIMEAKDSRIKVTSETMKNIRILKLHSWETSFLQKLLQLRETERRWLQKYLYTCSAVATLFWTSPTLVSVVTFGACILVKTELTAATVLSALATFRILQEPIYNLPELISMIIQTKVSVDRIQEFIKEDDQNQFTNRHAPKTSAVAIEIKLGEYAWETNDQTLKKPTIQITEKLVIRKGQKVAVCGSVGSGKSSLFCCMLGEIPLVSGAVTEVYGTRSYVPQSPWIQSGTVRENILFGKQMKKDFYEDVLDGCALHQDIKMWGDGDLYLVEERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGTHLFKKCLMKLLYDKTVVYATHQLEFLEAADLILVMKDGKIVESGRYKDLIACPNCELVQQMAAHQETVNQINPCHEDDSASCRPCQKNQIEVAEENIQEIIENWKRNKEEEAETGRVKWSVYSTFVTSAYKGALVPVILLCQILFQVMQMGSNYWISWATEERGRVNNKQLMGTFVLLSCGGTIFILGRTVLMAAIAVETAQRLFHGMITSVFRAPVSFFDTTPSSRIMSRSSTDQSTVDTDIPYRLAGLVFALIQLLSIIVLMSQVAWQVILFFFVALAISIWYQAYYITTARELARMVGIRKAPILHHFSESIAGVATIRCFNQEQLFLTKSKALIDDYSRVAFYNFGTMEWLSVRINFLFNLVFFFVLVILVTLPRSTIDPSLAGLVATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSSIPSEAPLVIQDCRPELEWPKEGKVELHNLHIQYDPATPMVLKGVTCVFPGQKKIGIVGRTGSGKSTLVQALFRVVEPSKGCILIDGVDISKIGLQDLRSKLGIIPQDPTLFLGTVRTNLDPLEQHEDQELWEVLSKCHLAEIVRQDPRLLDAPVAENGENWSVGQRQLVCLARLLLKKRRILVLDEATASIDISTDNLIQKTIREETSGCTVITVAHRIPTVIDNDLVLVLDEGTIVEYDKPAQLLQNNYSSFSKLVSEFLRRSSQSNFQKR 1490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1270g00004 1490 FunFam ABC transporter C family member 3 1225 1477 - -
Mupr1270g00004 1490 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 929 1205 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr1270g00004 1490 CDD ABCC_MRP_domain1 626 831 - -
Mupr1270g00004 1490 Pfam ABC transporter 1259 1407 IPR003439 GO:0005524
Mupr1270g00004 1490 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 321 593 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr1270g00004 1490 SUPERFAMILY ABC transporter transmembrane region 929 1224 IPR036640 GO:0005524|GO:0016020
Mupr1270g00004 1490 SUPERFAMILY ABC transporter transmembrane region 318 606 IPR036640 GO:0005524|GO:0016020
Mupr1270g00004 1490 CDD ABC_6TM_ABCC_D2 927 1217 IPR044726 GO:0140359
Mupr1270g00004 1490 SMART AAA_5 657 831 IPR003593 GO:0016887
Mupr1270g00004 1490 SMART AAA_5 1268 1459 IPR003593 GO:0016887
Mupr1270g00004 1490 Pfam ABC transporter transmembrane region 321 580 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr1270g00004 1490 Pfam ABC transporter transmembrane region 931 1169 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr1270g00004 1490 Pfam ABC transporter 653 783 IPR003439 GO:0005524
Mupr1270g00004 1490 ProSitePatterns ABC transporters family signature. 756 770 IPR017871 GO:0005524|GO:0016887
Mupr1270g00004 1490 Gene3D - 650 875 IPR027417 -
Mupr1270g00004 1490 CDD ABC_6TM_ABCC_D1 321 601 IPR044746 GO:0140359
Mupr1270g00004 1490 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 628 854 IPR003439 GO:0005524
Mupr1270g00004 1490 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 197 1480 - -
Mupr1270g00004 1490 Coils Coil 879 906 - -
Mupr1270g00004 1490 Gene3D - 1225 1477 IPR027417 -
Mupr1270g00004 1490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 652 844 IPR027417 -
Mupr1270g00004 1490 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1242 1476 IPR003439 GO:0005524
Mupr1270g00004 1490 Gene3D ABC transporter type 1, transmembrane domain 306 611 IPR036640 GO:0005524|GO:0016020
Mupr1270g00004 1490 Gene3D ABC transporter type 1, transmembrane domain 891 1223 IPR036640 GO:0005524|GO:0016020
Mupr1270g00004 1490 FunFam Multidrug resistance-associated protein 4 611 871 - -
Mupr1270g00004 1490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1235 1467 IPR027417 -
Mupr1270g00004 1490 FunFam ABC transporter C family member 5 891 1223 - -
Mupr1270g00004 1490 CDD ABCC_MRP_domain2 1240 1460 - -
Mupr1270g00004 1490 FunFam ABC transporter C family member 10 298 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1270g00004 Mupr-Chr1270 52485 58327 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1270g00004 644 876 Calmodulin-binding Proteins AT2G36910 28.112 3.75e-18 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1270g00004 - - gmx:100809063 2495.31