Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12696g00001 ATGGGAAGAAGAAACGGTGGCGGAAGGTCTCTGCAAGAAACCCTCCGTCGTAGACTTGAATCGTGCAAGTCCACATACTCTACCGCCGAAGAATTAGTCAACCATCTCCGGTCAACTTACCCCGATTACCAACGAGCCAAGCACCAAACACTAATTCGATTAGTTCAGGAAGCTCTTCACGCCACCAAGAAGCCCAACCATTGCGACGATGACGACCACGAAGGAGACTCTCGAATCGCGTCACGAAAGCGCCGGAAGAAAATCGACGCGAGTGAAGAGAGACTGCAAAGGATGGAAGCGTTGCATGTCCGAAGGAGGGCGCAGAGCGGTCCCTCAGCGCCGTCCTCCGCTTCGGAGAGCGACGTGGAAGGAACATTGTCCACGTCGGAGGACGCAATTTACGAGGAGAGGGTGGAACCTGAGTTCGATTTGATGAAGACAATGCTGCGCAATACCTATATGCCGAAGAAGGTTGCGACGGTGGAGGAAAAGAACGTTGAATTGGAGGTGGGGAGTAGCAGTAAGGCTATTGCAAACGAGGAAAGGAAGGAAGTGAGGGGTTCGGTTTTGGGCGGTGAAGTGAAGGGGAATCTTGGACCTATGTTTAGGGACTTGGGTGGTATGAAGGAGGTTTTGGAAGAACTGAAGATGGAAGTGATTGTGCCTTTGTACCATCCCCAATTGCCTAGGCAGTTAGGTGTGAGGCCAATGGCTGGCATTTTGCTTCATGGACCACCTGGCTGTGGGAAGACTAGACTTGCTCATGCCATAGCTAACGAGACTGGTCTTCCTTTCTATAAGATTTCAGCTACTGAGGTGGTTTCTGGAGTCTCTGGTGCATCGGAAGAAAATATTAGAGAGCTTTTCTCCAAAGCATACAGGACTGCACCGTCTATTGTCTTTATTGATGAGATTGATGCAATTGCTTCGAAGAGAGAGAATTTACAGCGTGAGATGGAGAAACGAATTGTAACACAATTAATGACCTGCATGGATCAATCAAATAGGCTTCTCCAACCAGCGGACGATTCAGAGAGATCTGATGATCATCAGCCTGGCTATGTTCTTGTAATTGGAGCTACAAATAGGCCTGATGCTGTTGACCCTGCCCTGAGAAGGCCTGGTCGTTTTGATCGCGAGATTATCATTGGCAATCCTGATGAATCTGCCAGGGAGGAGATCCTTTCTGTGCTTACGGGCAATCTTAGACGTGTGGGTTTATTTAATCTACGGAAATTAGCCAGGGCTACACCAGGATTTGTTGGTGCTGATTTGGAAGCACTGGTTAACAAGGCTGGTAATCTGGCAATGAAGAGAATAATTGATGAAAGGAAACGGGAATTATCTCAAGAAGTCATGAGTGAGCATGCTGAAGACTGGTGGAGGGAACCTTGGTCATCTGAACAAATAGATAAGCTTGCCATCAAAATGTCCGATTTTGAGGAAGCAGTCAAAGTGGTGCAACCTTCATCAAGAAGAGAAGGGTTCTCTTCCATTCCCAATGTAAAATGGGAAGACGTTGGAGGGCTTGATCTTCTAAGACAGGAGTTTGAACGTTACATTGTAAGGCGTATAAAATATCCTGAAGATTATGAGGGGTTTGGGGTGGATCTCGAGACTGGATTTTTGCTTTATGGACCTCCTGGTTGTGGTAAAACACTGATTGCCAAAGCTGTTGCCAACGAGGCAGGTGCTAGTTTTATTCATATTAAGGGACCTGAACTTTTAAATAAATATGTTGGAGAAAGTGAGCTTGCAGTTCGTACATTGTTTAGCCGGGCAAGGACATGTGCGCCTTGTATACTGTTTTTTGATGAGGTGGATGCTTTGACAACCAAACGGGGTAAAGAAGGCGGTTGGGTTATTGAACGACTATTGAACCAGTTACTTATTGAGTTAGATGGTGCAGAGCAACGACGGGGTGTGTTTGTGATTGGTGCTACTAATAGGCCCGAGGTGATGGATCCTGCTGTCCTACGGCCTGGTAGGCTTGGTAAACTTCTTTATGTTCCACTTCCAAGCCCAGACGAGCGAGTTTTGATTCTGAAAACTCTTGCAAGGAAGAAGCCTGTTGACGCCTCTGTGGATTTGAGTGTCATAGGAAAAATGGAAGCTTGTGAAAGCTTTAGTGGCGCCGATCTTGCTGCATTGATGAATGAAGCAGCAATGGCTGCTCTTGAAGAGAAATTGACATCGACCGAGACAACTTGTGGCGCACATACCATCAAGATAAATCATTTTGAGGTTGCACTGAGTAAAGTCTCTCCGTCTGTGTCGGACAGGCAAAAGCAGTACTATCAGCACTTGTCAGAGAGCTTTAAAGCAGCATGA 2331 0.468 MGRRNGGGRSLQETLRRRLESCKSTYSTAEELVNHLRSTYPDYQRAKHQTLIRLVQEALHATKKPNHCDDDDHEGDSRIASRKRRKKIDASEERLQRMEALHVRRRAQSGPSAPSSASESDVEGTLSTSEDAIYEERVEPEFDLMKTMLRNTYMPKKVATVEEKNVELEVGSSSKAIANEERKEVRGSVLGGEVKGNLGPMFRDLGGMKEVLEELKMEVIVPLYHPQLPRQLGVRPMAGILLHGPPGCGKTRLAHAIANETGLPFYKISATEVVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRENLQREMEKRIVTQLMTCMDQSNRLLQPADDSERSDDHQPGYVLVIGATNRPDAVDPALRRPGRFDREIIIGNPDESAREEILSVLTGNLRRVGLFNLRKLARATPGFVGADLEALVNKAGNLAMKRIIDERKRELSQEVMSEHAEDWWREPWSSEQIDKLAIKMSDFEEAVKVVQPSSRREGFSSIPNVKWEDVGGLDLLRQEFERYIVRRIKYPEDYEGFGVDLETGFLLYGPPGCGKTLIAKAVANEAGASFIHIKGPELLNKYVGESELAVRTLFSRARTCAPCILFFDEVDALTTKRGKEGGWVIERLLNQLLIELDGAEQRRGVFVIGATNRPEVMDPAVLRPGRLGKLLYVPLPSPDERVLILKTLARKKPVDASVDLSVIGKMEACESFSGADLAALMNEAAMAALEEKLTSTETTCGAHTIKINHFEVALSKVSPSVSDRQKQYYQHLSESFKAA 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12696g00001 776 ProSitePatterns AAA-protein family signature. 355 373 IPR003960 GO:0005524|GO:0016887
Mupr12696g00001 776 Gene3D - 386 494 - -
Mupr12696g00001 776 Pfam AAA+ lid domain 694 732 IPR041569 -
Mupr12696g00001 776 Pfam AAA+ lid domain 409 443 IPR041569 -
Mupr12696g00001 776 Gene3D - 500 766 IPR027417 -
Mupr12696g00001 776 PANTHER AAA-FAMILY ATPASE 86 774 - -
Mupr12696g00001 776 FunFam Cell division control protein 48 homolog C 386 494 - -
Mupr12696g00001 776 MobiDBLite consensus disorder prediction 109 127 - -
Mupr12696g00001 776 Pfam ATPase family associated with various cellular activities (AAA) 240 384 IPR003959 GO:0005524|GO:0016887
Mupr12696g00001 776 Pfam ATPase family associated with various cellular activities (AAA) 543 671 IPR003959 GO:0005524|GO:0016887
Mupr12696g00001 776 ProSitePatterns AAA-protein family signature. 642 660 IPR003960 GO:0005524|GO:0016887
Mupr12696g00001 776 Gene3D - 199 384 IPR027417 -
Mupr12696g00001 776 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 493 IPR027417 -
Mupr12696g00001 776 Gene3D - 673 752 - -
Mupr12696g00001 776 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 500 773 IPR027417 -
Mupr12696g00001 776 FunFam Ribosome biogenesis ATPase RIX7 193 384 - -
Mupr12696g00001 776 SMART AAA_5 538 674 IPR003593 GO:0016887
Mupr12696g00001 776 SMART AAA_5 236 387 IPR003593 GO:0016887
Mupr12696g00001 776 CDD RecA-like_NVL_r2-like 510 670 - -
Mupr12696g00001 776 MobiDBLite consensus disorder prediction 63 104 - -
Mupr12696g00001 776 MobiDBLite consensus disorder prediction 63 133 - -
Mupr12696g00001 776 FunFam ATPase, AAA family protein 500 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12696g00001 Mupr-Chr12696 2673 7807 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12696g00001 197 774 Calmodulin-binding Proteins AT3G56690 37.697 1.14e-121 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12696g00001 K14571 - gmx:100809594 1263.06