Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr12695g00002 ATGGAACCTTCCCTTATTAACGACTCCACATTCTCCTCCGCTAACCCTTCCTTGTCCGATATTTGGCCCGACCACACCCCCAGGAAGAGGCACAACCTCCTTCAAAATTTGGAACACAATACCAATAAACATATAAAATTAGATGCAGGATCTCACGATGAAAACGCTGCGTTTTTTAAGGTAGCCGGTGACAAGTTACCTGAACCGAATTCCGAGAAGCCACCTAAGCAAGATTACATACACGTGCGAGCCAGAAGGGGCCAAGCCACCGATAGCCACAGTCTCGCTGAGAGAGCTAGAAGAGAAAAGATCAGTGAGAGGATGAAAATTCTTCAAGATTTAGTCCCCGGCTGCAATAAGGTAATTGGTAAAGCACTTGTCCTCGATGAGATAATTAATTATATCCAGTCACTGCAGCGTCAAGTTGAGTTCCTTTCAATGAAGCTTGAGGCAGTTAATTCGAGATTGAACACGAGTCCTACTATTGAATGTTTTCCTTCAAAAGAAGTTGGCACTCAGCCATTTGACCTTGCCGGAATAATATTTGGATCACAACCTGTCAGGGGATATGCTCAAGGATCACAACCTGGATGGCTGCATATGCAGATAGCTGGTGATTTTGGGAAAGCAACATAA 636 0.4434 MEPSLINDSTFSSANPSLSDIWPDHTPRKRHNLLQNLEHNTNKHIKLDAGSHDENAAFFKVAGDKLPEPNSEKPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTSPTIECFPSKEVGTQPFDLAGIIFGSQPVRGYAQGSQPGWLHMQIAGDFGKAT 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr12695g00002 211 FunFam Basic helix-loop-helix transcription factor 85 157 - -
Mupr12695g00002 211 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 86 157 IPR036638 GO:0046983
Mupr12695g00002 211 Coils Coil 135 155 - -
Mupr12695g00002 211 MobiDBLite consensus disorder prediction 1 20 - -
Mupr12695g00002 211 Gene3D - 85 162 IPR036638 GO:0046983
Mupr12695g00002 211 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 52 181 IPR024097 GO:0006355
Mupr12695g00002 211 SMART finulus 94 144 IPR011598 GO:0046983
Mupr12695g00002 211 Pfam Helix-loop-helix DNA-binding domain 92 139 IPR011598 GO:0046983
Mupr12695g00002 211 CDD bHLH_AtBPE_like 78 161 - -
Mupr12695g00002 211 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 88 138 IPR011598 GO:0046983
Mupr12695g00002 211 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr12695g00002 Mupr-Chr12695 6542 9653 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr12695g00002 70 211 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G62610 68.310 2.48e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr12695g00002 HLH 1.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr12695g00002 - - gmx:100799646 332.798