LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr12694g00001	ATGTCTAACTCGGAGACAAAGAAGAAGAAGCGCAGCAGCGGCAAACAGTCGGAGGATGATACGAAAGAGGAGGGGTTGATGATAAAGCCCCAGAGCTTCACTCCCTCCATCGACACCTCCCAATGGCCCATCCTTCTCAAAAACTACGACCGCCTCAATGTCCGCACCGGTCACTACACTCCCATCCCTTCCGGATACTCTCCCCTTAAGCGCCCCCTCGCCGAGTACCTTAAGTACGGCGTCCTCAACCTCGACAAGCCCGCCAACCCCTCCTCTCACGAGGTTGTCGCGTGGATCAAGCGCATCCTCCGCGTCGAGAAAACCGGTCACAGCGGCACCCTCGACCCCAAGGTCACCGGCAACCTCATCGTCTGCATCGACCGCGCCACCCGCCTCGTCAAGTCCCAGCAGGGCGCCGGCAAGGAGTATGTCTGCATCGCCCGCCTCCACTCCGCCGTCCCCGACCCTTCCAAGGTCGCCCGCGCCCTCGAGACCCTCACCGGCGCCGTCTTCCAGCGCCCTCCTCTCATCTCCGCCGTTAAGCGTCAGCTCCGCATTCGCACCATCTACGAAAGTAAGCTCCTTGAGTTCGACCCTGATAAGCACTTGGTTGTTTTCTGGATTTCCTGCGAAGCTGGCACCTATGTCAGGACCATGTGCGTCCACTTGGGCCTTCTTCTCGGTGTCGGTAGCCACATGCAGGAACTTAGGAGGGTTCGCTCTGGCATCATGGGCGAGAAGGATAACATGGTTTCCATGCACGATGTCATGGATGCTCAGTGGGTTCATGATAATTTTAGAGACGAGACTTACCTCAGGAGGGTTGTTATGCCCTTGGAGGTTCTCTTGACTAGTTATAAGAGGCTTGTTGTTAAGGACTCTGCTGTTAACGCCATTTGTTATGGTGCCAAGTTGATGATTCCTGGATTGCTTAGGTTCGAGAATGATATTGATGTTGGGGAGGAGGTTGTGCTCATGACTACCAAGGGTGAGGCCATTGCTCTTGGGATTGCTGAGATGACTACTGCTGTTATGGCCACTTGTGATCATGGTGTTGTGGCCAAGATCAAGAGGGTGGTCATGGATAGGGATACTTATCCCAGGAAGTGGGGCTTGGGCCCCAGGGCTTCCATGAAGAAGAAGCTCGTTGCCGAAGGGAAGCTGGATAAGCATGGCAAGCCCAATGATAAGACTCCCCAGGAGTGGCTTAGGAATTTGGTTTTGCCATCTGGTGGGGATAGTGTCATTGCTGGCATGGCTGCTGCCCCTGAACCTGAGGATGAGAAGGTTAAGAAGGATGGAGATGGAGATGGAGAAGGGCGGAAGAGGAAGAAGCATGATAGCACGGATAGCCCGCTTTTGGTTCCTGCTAAGAAGGTGAAAGTGGATGAAGTAGTCGAAGAGGCTGTGGAGGTTGAAGTCGGGAAGAAGGAGAAGAAGAAGAAAAAGAAGAAGGATAAAGAGGGAAGCGAAGTGGTGTCTTCTGATGAGGAGAAGGCTGAGAAGAAGAAGAAGCACAAGGATAAGGTTGAAGATGGTTCGCCTGATGTAGACAAGTCTGAGAAGAAAAAGAAGAAGAAGAAAGACAAAGATGCTGCTGAAGATGCCCCTGCTGAAATTAGCAACGGAAAGGATGATAAGAGTGAAAAGAAGAAGCATAAGAAAAAGAAAAACAAAGATGCCGAGGAAGAATAG	1695	0.5245	MSNSETKKKKRSSGKQSEDDTKEEGLMIKPQSFTPSIDTSQWPILLKNYDRLNVRTGHYTPIPSGYSPLKRPLAEYLKYGVLNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCIARLHSAVPDPSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEFDPDKHLVVFWISCEAGTYVRTMCVHLGLLLGVGSHMQELRRVRSGIMGEKDNMVSMHDVMDAQWVHDNFRDETYLRRVVMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIDVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKKLVAEGKLDKHGKPNDKTPQEWLRNLVLPSGGDSVIAGMAAAPEPEDEKVKKDGDGDGEGRKRKKHDSTDSPLLVPAKKVKVDEVVEEAVEVEVGKKEKKKKKKKDKEGSEVVSSDEEKAEKKKKHKDKVEDGSPDVDKSEKKKKKKKDKDAAEDAPAEISNGKDDKSEKKKHKKKKNKDAEEE	564

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr12694g00001	564	SMART	pua_5	287	361	IPR002478	GO:0003723
	Mupr12694g00001	564	SMART	DKCLD_2	38	96	IPR012960	-
	Mupr12694g00001	564	Pfam	PUA domain	287	359	IPR002478	GO:0003723
	Mupr12694g00001	564	Coils	Coil	544	564	-	-
	Mupr12694g00001	564	NCBIfam	RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5	46	371	IPR004802	GO:0006396
	Mupr12694g00001	564	MobiDBLite	consensus disorder prediction	460	477	-	-
	Mupr12694g00001	564	Gene3D	PUA domain	39	370	IPR036974	GO:0003723
	Mupr12694g00001	564	MobiDBLite	consensus disorder prediction	1	29	-	-
	Mupr12694g00001	564	Gene3D	Pseudouridine synthase	72	278	-	-
	Mupr12694g00001	564	CDD	PseudoU_synth_hDyskerin	78	260	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr12694g00001	Mupr-Chr12694	844	2538	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr12694g00001	4	461	NAC Transcription Factor Family	AT3G57150	82.646	0.0	745

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr12694g00001	K11131		-	gmx:100780706	821.617

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